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authorajschadler122024-04-30 19:30:20 -0700
committerajschadler122024-05-01 10:06:27 -0700
commite97ef4109e558517b11620e4019ef744a5e66a88 (patch)
tree90c9df0a297a41a8d7aa0d2b3e0c4975120cc7ae
parent28a156857eed48fd96437ded503d7422ba53d7a6 (diff)
downloadaur-afni.tar.gz
version bump and adding profile scripts
-rw-r--r--.SRCINFO21
-rw-r--r--.gitignore2
-rw-r--r--PKGBUILD18
-rw-r--r--afni.csh1
-rw-r--r--afni.sh1
5 files changed, 35 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 377689863f4e..4b06d7514104 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = afni
pkgdesc = An open-source environment for processing and displaying functional MRI data
- pkgver = 23.2.06
+ pkgver = 24.1.06
pkgrel = 1
url = http://afni.nimh.nih.gov
arch = x86_64
@@ -18,9 +18,22 @@ pkgbase = afni
depends = libxft
depends = freeglut
depends = xorg-server-xvfb
- source = afni-23.2.06.tar.gz::https://github.com/afni/afni/archive/AFNI_23.2.06.tar.gz
+ optdepends = r-afex
+ optdepends = r-phia
+ optdepends = r-snow
+ optdepends = r-lmertest
+ optdepends = r-paran
+ optdepends = r-psych
+ optdepends = r-brms
+ optdepends = r-corrplot
+ optdepends = r-metafor
+ source = afni-24.1.06.tar.gz::https://github.com/afni/afni/archive/AFNI_24.1.06.tar.gz
source = Makefile.patch
- md5sums = 42f240865a975b3f6b528ae40045337e
- md5sums = 2cc1916ecd1e775f52d189f1dd5b0ed9
+ source = afni.csh
+ source = afni.sh
+ sha256sums = 84046db43c3e7e8cb75cfc108fff238aaf85cbb4c54d1c7ad51a11cbd7e003a4
+ sha256sums = 70f525c0637581b332ae15f4076ac6626599296c99e33c133b0dd929a00b7f72
+ sha256sums = b43c09b3ccc20c5c56ce837d7cd6baee3b880f9eeffaab51bfd086bdc5248c8b
+ sha256sums = 0322cef3fa43a0a63f6614d26a76b2f54bde70c12c7867952984c6db1935b87c
pkgname = afni
diff --git a/.gitignore b/.gitignore
index b3a336b42a1f..f995109a8de3 100644
--- a/.gitignore
+++ b/.gitignore
@@ -3,3 +3,5 @@
!.SRCINFO
!.gitignore
!Makefile.Patch
+!afni.csh
+!afni.sh
diff --git a/PKGBUILD b/PKGBUILD
index e226647fa8bd..be5179425a5e 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,18 +1,25 @@
# Maintainer: Liam Timms <timms5000@gmail.com>
+# Co-Maintainer: Adam Schadler <ajschadler12 g-mail>
# Contributor: Chris <christopher.r.mullins g-mail>
# Contributor: cornholio <vigo.the.unholy.carpathian@gmail.com>
# Contributor: martin <martin pipegrep.co.uk>
pkgname=afni
-pkgver=23.2.06
+pkgver=24.1.06
pkgrel=1
pkgdesc="An open-source environment for processing and displaying functional MRI data"
arch=("x86_64")
url="http://afni.nimh.nih.gov"
license=(custom)
depends=("r" "tcsh" "python" "gcc-libs" "gsl" "libxpm" "glu" "openmotif" "libjpeg-turbo" "libxmu" "libxft" "freeglut" "xorg-server-xvfb")
-source=("$pkgname-$pkgver.tar.gz::https://github.com/afni/afni/archive/AFNI_$pkgver.tar.gz" "Makefile.patch")
-md5sums=('42f240865a975b3f6b528ae40045337e'
- '2cc1916ecd1e775f52d189f1dd5b0ed9')
+optdepends=('r-afex' 'r-phia' 'r-snow' 'r-lmertest' 'r-paran' 'r-psych' 'r-brms' 'r-corrplot' 'r-metafor')
+source=("$pkgname-$pkgver.tar.gz::https://github.com/afni/afni/archive/AFNI_$pkgver.tar.gz"
+ "Makefile.patch"
+ "afni.csh"
+ "afni.sh")
+sha256sums=('84046db43c3e7e8cb75cfc108fff238aaf85cbb4c54d1c7ad51a11cbd7e003a4'
+ '70f525c0637581b332ae15f4076ac6626599296c99e33c133b0dd929a00b7f72'
+ 'b43c09b3ccc20c5c56ce837d7cd6baee3b880f9eeffaab51bfd086bdc5248c8b'
+ '0322cef3fa43a0a63f6614d26a76b2f54bde70c12c7867952984c6db1935b87c')
prepare() {
cd "$srcdir"/afni-AFNI_$pkgver/src
@@ -33,4 +40,7 @@ package(){
find "$pkgdir"/opt/afni -name \*.h -delete
mkdir -p "$pkgdir"/usr/share/licenses/afni
cp "$srcdir"/afni-AFNI_$pkgver/doc/README/README.copyright "$pkgdir"/usr/share/licenses/afni/LICENSE
+ mkdir -p "${pkgdir}/etc/profile.d"
+ cp "${srcdir}/afni.sh" "${pkgdir}/etc/profile.d"
+ cp "${srcdir}/afni.csh" "${pkgdir}/etc/profile.d"
}
diff --git a/afni.csh b/afni.csh
new file mode 100644
index 000000000000..aae8e6e8568d
--- /dev/null
+++ b/afni.csh
@@ -0,0 +1 @@
+setenv PATH "${PATH}:/opt/afni"
diff --git a/afni.sh b/afni.sh
new file mode 100644
index 000000000000..a2f5aff8431f
--- /dev/null
+++ b/afni.sh
@@ -0,0 +1 @@
+export PATH=${PATH}:/opt/afni