Initial commit

2 files changed, 42 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..e0e9d42b4824
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,17 @@
+pkgbase = alignace
+	pkgdesc = Program that finds sequence elements conserved in a set of DNA sequences
+	pkgver = 1.0
+	pkgrel = 2
+	url = http://arep.med.harvard.edu/mrnadata/mrnasoft.html
+	arch = i686
+	arch = x86_64
+	license = custom
+	makedepends = rpmextract
+	depends = sh
+	source = http://arep.med.harvard.edu/mrnadata/software/alignace.tar.gz
+	source = http://rpmfind.net/linux/redhat-archive/6.2/en/os/i386/RedHat/RPMS/libstdc++-2.9.0-30.i386.rpm
+	md5sums = 6d2d9fb0929ce03974dca874b516cd07
+	md5sums = 29ca50829f6d43c63d8fcc827b3daceb
+
+pkgname = alignace
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..d9603f4f56f1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,25 @@
+#Maintainer: allencch <allencch at hotmail dot com>
+pkgname=alignace
+pkgver=1.0
+pkgrel=3
+pkgdesc="Program that finds sequence elements conserved in a set of DNA sequences"
+arch=('i686' 'x86_64')
+url="http://arep.med.harvard.edu/mrnadata/mrnasoft.html"
+license=('custom')
+depends=("sh")
+makedepends=('rpmextract')
+source=("http://arep.med.harvard.edu/mrnadata/software/${pkgname}.tar.gz" "http://rpmfind.net/linux/redhat-archive/6.2/en/os/i386/RedHat/RPMS/libstdc++-2.9.0-30.i386.rpm")
+md5sums=('6d2d9fb0929ce03974dca874b516cd07'
+         '29ca50829f6d43c63d8fcc827b3daceb')
+
+package() {
+	rpmextract.sh "${srcdir}/libstdc++-2.9.0-30.i386.rpm"
+	cd "${srcdir}/${pkgname}"
+	mkdir -p "${pkgdir}/usr/bin"
+	mkdir -p "${pkgdir}/usr/lib"
+	install -m755 AlignACE "${pkgdir}/usr/bin"
+	install -m755 ScanACE "${pkgdir}/usr/bin"
+	#install -m755 ../usr/i386-glibc22-linux/lib/libstdc++-libc6.1-1.so.2 "${pkgdir}/usr/lib"
+	#install -m755 ../usr/i386-glibc22-linux/lib/libstdc++-2-libc6.1-1-2.9.0.so "${pkgdir}/usr/lib"
+	install -m755 ../usr/lib/libstdc++-2-libc6.1-1-2.9.0.so "${pkgdir}/usr/lib"
+}