Initial import

3 files changed, 91 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..9f96b2c9f073
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,19 @@
+pkgbase = avida
+	pkgdesc = A software platform to study evolution of digital organisms
+	pkgver = 2.12.4
+	pkgrel = 1
+	url = http://avida.devosoft.org/
+	arch = i686
+	arch = x86_64
+	license = GPL3
+	license = custom
+	makedepends = cmake
+	depends = gcc-libs
+	depends = ncurses
+	source = http://downloads.sourceforge.net/avida/avida-2.12.4-src.tar.gz
+	source = avida.patch
+	md5sums = db4a687190f9fcc8b8ae84613d536d0a
+	md5sums = a7ac844269d3f169f53e8e30005755f5
+
+pkgname = avida
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f611b757a52f
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,52 @@
+# Contributor: Anton Bazhenov <anton.bazhenov at gmail>
+# Contributor: Dmitriy Morozov <archlinux@foxcub.org>
+
+pkgname=avida
+pkgver=2.12.4
+pkgrel=1
+pkgdesc="A software platform to study evolution of digital organisms"
+arch=('i686' 'x86_64')
+url="http://avida.devosoft.org/"
+license=('GPL3' 'custom')
+depends=('gcc-libs' 'ncurses')
+makedepends=('cmake')
+source=("http://downloads.sourceforge.net/$pkgname/$pkgname-$pkgver-src.tar.gz"
+        avida.patch)
+md5sums=('db4a687190f9fcc8b8ae84613d536d0a'
+         'a7ac844269d3f169f53e8e30005755f5')
+
+prepare() {
+  cd "$srcdir/avida-$pkgver-src"
+  patch -p 1 < ../avida.patch
+}
+
+build() {
+  cd "$srcdir/avida-$pkgver-src"
+  cmake .
+  make
+}
+
+package() {
+  cd "$srcdir/avida-$pkgver-src"
+
+  # Install binaries and config files
+  mkdir -p "${pkgdir}/opt/${pkgname}"
+  install -m755 bin/avida* "${pkgdir}/opt/${pkgname}"
+  install -m664 -g users avida-core/support/config/*.{cfg,org} "${pkgdir}/opt/${pkgname}"
+
+  # Install headers and libraries
+  mkdir -p "${pkgdir}/usr/"{include,lib}
+  cp -r libs/apto/include/* "${pkgdir}/usr/include"
+  cp -r lib/* "${pkgdir}/usr/lib"
+
+  # Install launchers
+  mkdir -p "${pkgdir}/usr/bin"
+  echo 'cd /opt/avida && ./avida' > "${pkgdir}/usr/bin/avida"
+  echo 'cd /opt/avida && ./avida-viewer' > "${pkgdir}/usr/bin/avida-viewer"
+  chmod 755 "${pkgdir}/usr/bin/"{avida,avida-viewer}
+
+  # Install documentation and Apto license
+  mkdir -p "${pkgdir}/usr/share/doc/${pkgname}"
+  cp -r avida-core/documentation/* "${pkgdir}/usr/share/doc/${pkgname}"
+  install -Dm644 libs/apto/LICENSE "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE_APTO"
+}
diff --git a/avida.patch b/avida.patch
new file mode 100644
index 000000000000..fffe9fcbb869
--- /dev/null
+++ b/avida.patch
@@ -0,0 +1,20 @@
+--- avida-2.12.3-src.orig/avida-core/source/analyze/cAnalyzeTreeStats_Gamma.cc	2012-02-02 22:50:29.000000000 +0600
++++ avida-2.12.3-src/avida-core/source/analyze/cAnalyzeTreeStats_Gamma.cc	2012-05-08 19:32:18.793044457 +0600
+@@ -27,6 +27,7 @@
+ 
+ #include <math.h>
+ #include <iostream>
++#include <cstdlib>
+ 
+ using namespace std;
+ 
+--- avida-2.12.3-src.orig/avida-core/source/tools/tArray.h	2012-02-02 22:50:29.000000000 +0600
++++ avida-2.12.3-src/avida-core/source/tools/tArray.h	2012-05-08 19:33:04.783042892 +0600
+@@ -24,6 +24,7 @@
+ #define tArray_h
+ 
+ #include <cassert>
++#include <cstdlib>
+ 
+ #ifndef NULL
+ #define NULL 0