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authorKuoi2022-04-18 13:29:37 +0100
committerKuoi2022-04-18 13:29:37 +0100
commitf1cee8b496a21ac3c2ede39661fd8b9e0a14e7ce (patch)
treea9665690d9447d2c6ad48f4324bab68286857858
parentcfb9a6ae53c3833e724f3f9b1498f3ea847fa983 (diff)
downloadaur-f1cee8b496a21ac3c2ede39661fd8b9e0a14e7ce.tar.gz
38.96
-rw-r--r--.SRCINFO12
-rw-r--r--PKGBUILD8
2 files changed, 10 insertions, 10 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 4e2ed284493d..e726c3b6bc61 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,16 +1,16 @@
pkgbase = bbmap
pkgdesc = A short read aligner and other bioinformatic tools
- pkgver = 37.99
- pkgrel = 3
+ pkgver = 38.96
+ pkgrel = 1
url = https://jgi.doe.gov/data-and-tools/bbtools/
arch = x86_64
license = BSD
- depends = jre8-openjdk>=7
+ depends = jre8-openjdk
+ depends = jdk8-openjdk
optdepends = env-modules: for any scripts requiring `module`
optdepends = pigz: for parallel GZIP (de)compression
optdepends = samtools: for BAM output
- source = bbmap-37.99.tar.gz::https://downloads.sourceforge.net/project/bbmap/BBMap_37.99.tar.gz
- sha256sums = e796b399ba1a8d3ce4688b7d2d35f065754d4cdeddf09bb9a2f15ba77694f401
+ source = bbmap-38.96.tar.gz::https://downloads.sourceforge.net/project/bbmap/BBMap_38.96.tar.gz
+ sha256sums = 18d9c89b02c0ab044b2795a65f6236b2262a494ed83d27e31750437b350ef080
pkgname = bbmap
-
diff --git a/PKGBUILD b/PKGBUILD
index 43cf97956255..4bc81cd6e402 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,20 +1,20 @@
# Maintainer: Clint Valentine <valentine.clint@gmail.com>
pkgname=bbmap
-pkgver=37.99
-pkgrel=3
+pkgver=38.96
+pkgrel=1
pkgdesc="A short read aligner and other bioinformatic tools"
arch=('x86_64')
url=https://jgi.doe.gov/data-and-tools/bbtools/
license=('BSD')
-depends=('jre8-openjdk>=7')
+depends=('jre8-openjdk' 'jdk8-openjdk')
optdepends=(
'env-modules: for any scripts requiring `module`'
'pigz: for parallel GZIP (de)compression'
'samtools: for BAM output'
)
source=("${pkgname}"-"${pkgver}".tar.gz::https://downloads.sourceforge.net/project/"${pkgname}"/BBMap_"${pkgver}".tar.gz)
-sha256sums=('e796b399ba1a8d3ce4688b7d2d35f065754d4cdeddf09bb9a2f15ba77694f401')
+sha256sums=('18d9c89b02c0ab044b2795a65f6236b2262a494ed83d27e31750437b350ef080')
prepare() {
cd "${srcdir}"/"${pkgname}"/jni