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authorChristian Krause2016-11-07 13:57:06 +0100
committerChristian Krause2016-11-07 13:57:06 +0100
commitcac6b6a4dec3b6e17f2d1252b1b21512c9034909 (patch)
tree3c287ac5b19230327b2b001ad0371f0a9e8bdb3e
parentb18887a40ff484b6ededeec906fe0f088b0321aa (diff)
downloadaur-cac6b6a4dec3b6e17f2d1252b1b21512c9034909.tar.gz
beagle-lib-1:2.1.2-3
-rw-r--r--.SRCINFO7
-rw-r--r--PKGBUILD17
2 files changed, 17 insertions, 7 deletions
diff --git a/.SRCINFO b/.SRCINFO
index eac813a49954..866f9f197506 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,15 +1,18 @@
+# Generated by mksrcinfo v8
+# Mon Nov 7 12:56:52 UTC 2016
pkgbase = beagle-lib
pkgdesc = general purpose library for evaluating the likelihood of sequence evolution on trees
pkgver = 2.1.2
- pkgrel = 2
+ pkgrel = 3
epoch = 1
url = https://github.com/beagle-dev/beagle-lib
arch = i686
arch = x86_64
license = GPL3
+ makedepends = java-environment
depends = libtool
optdepends = cuda-toolkit: for CUDA support
- optdepends = java-environment: for Java support
+ optdepends = java-runtime: for Java support
optdepends = libcl: for OpenCL support
conflicts = beagle-lib-git
conflicts = beagle-lib-svn
diff --git a/PKGBUILD b/PKGBUILD
index 0d1aa23d1b3c..b2cf75755627 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
pkgname=beagle-lib
pkgver=2.1.2
-pkgrel=2
+pkgrel=3
epoch=1
pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees"
arch=('i686' 'x86_64')
@@ -10,8 +10,9 @@ url="https://github.com/beagle-dev/beagle-lib"
license=('GPL3')
depends=('libtool')
optdepends=('cuda-toolkit: for CUDA support'
- 'java-environment: for Java support'
+ 'java-runtime: for Java support'
'libcl: for OpenCL support')
+makedepends=('java-environment')
conflicts=('beagle-lib-git' 'beagle-lib-svn')
source=("https://github.com/beagle-dev/beagle-lib/archive/beagle_release_${pkgver//./_}.tar.gz")
md5sums=('1107614e86f652f8ee45c1c92f2af3d4')
@@ -25,15 +26,21 @@ prepare() {
build() {
cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}
+ export JAVA_HOME=/usr/lib/jvm/default
+
./configure \
--prefix=/usr \
- --enable-openmp \
- --without-opencl \
- --with-jdk=/usr/lib/jvm/java-8-openjdk
+ --enable-openmp
make
}
+check() {
+ cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}
+
+ make check
+}
+
package() {
cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}