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author | clintval | 2018-01-17 23:17:57 -0800 |
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committer | clintval | 2018-01-17 23:17:57 -0800 |
commit | 7e3cae32b438ddf36616dd9aa6283522773cc219 (patch) | |
tree | b4a2e9ddbaab40e2cd451d696258c8867af5e58e | |
parent | b67944f0c285c5a3bfe92f8d1fa97f241d52c1b3 (diff) | |
download | aur-7e3cae32b438ddf36616dd9aa6283522773cc219.tar.gz |
biobambam to 2.0.83
-rw-r--r-- | .SRCINFO | 13 | ||||
-rw-r--r-- | PKGBUILD | 27 |
2 files changed, 16 insertions, 24 deletions
@@ -1,16 +1,13 @@ pkgbase = biobambam - pkgdesc = Bioinformatics BAM file pre-processing utilities - pkgver = 2.0.79 + pkgdesc = BAM file pre-processing utilities for bioinformatics. + pkgver = 2.0.83 pkgrel = 1 url = https://github.com/gt1/biobambam2 arch = x86_64 license = GPL3 - makedepends = gcc-libs - depends = libmaus>=2.0 - provides = biobambam - conflicts = biobambam - source = https://github.com/gt1/biobambam2/archive/2.0.79-release-20171006114010.tar.gz - md5sums = 534458a7b22e37bfd4b5b6e9c590553f + makedepends = libmaus + source = biobambam-2.0.83-20180105121132.tar.gz::https://github.com/gt1/biobambam2/archive/2.0.83-release-20180105121132.tar.gz + sha256sums = 28c751b899d5f2a4414ea0f36b43b91c129aea83447b93a0920875401c29ec35 pkgname = biobambam @@ -1,34 +1,29 @@ # Maintainer: Clint Valentine <valentine.clint@gmail.com> pkgname=biobambam -pkgver=2.0.79 +pkgver=2.0.83 pkgrel=1 -release=20171006114010 -pkgdesc="Bioinformatics BAM file pre-processing utilities" +_release=20180105121132 +pkgdesc="BAM file pre-processing utilities for bioinformatics." arch=('x86_64') url="https://github.com/gt1/biobambam2" license=('GPL3') -depends=('libmaus>=2.0') -makedepends=('gcc-libs') -provides=('biobambam') -conflicts=('biobambam') -source=("https://github.com/gt1/${pkgname}2/archive/${pkgver}-release-${release}.tar.gz") -md5sums=('534458a7b22e37bfd4b5b6e9c590553f') +makedepends=('libmaus') +source=("${pkgname}"-"${pkgver}"-"${_release}".tar.gz::https://github.com/gt1/"${pkgname}"2/archive/"${pkgver}"-release-"${_release}".tar.gz) +sha256sums=('28c751b899d5f2a4414ea0f36b43b91c129aea83447b93a0920875401c29ec35') MAKEFLAGS="-j$(nproc)" -build() -{ - cd "${srcdir}/${pkgname}2-${pkgver}-release-${release}" - ./configure \ - --prefix="${pkgdir}/usr" +build() { + cd "${srcdir}"/"${pkgname}2"-"${pkgver}"-release-"${_release}" + ./configure --prefix="${pkgdir}"/usr } check() { - cd "${srcdir}/${pkgname}2-${pkgver}-release-${release}" + cd "${srcdir}"/"${pkgname}2"-"${pkgver}"-release-"${_release}" make test } package() { - cd "${srcdir}/${pkgname}2-${pkgver}-release-${release}" + cd "${srcdir}"/"${pkgname}2"-"${pkgver}"-release-"${_release}" make install } |