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| author | clintval | 2017-12-19 11:49:15 -0500 |
|---|---|---|
| committer | clintval | 2017-12-19 11:49:15 -0500 |
| commit | b67944f0c285c5a3bfe92f8d1fa97f241d52c1b3 (patch) | |
| tree | f4a4b1fa53923ffa2605f59d4eb2b7ec56e35691 | |
| download | aur-b67944f0c285c5a3bfe92f8d1fa97f241d52c1b3.tar.gz | |
First commit with PKGBUILD and .SRCINFO
| -rw-r--r-- | .SRCINFO | 16 | ||||
| -rw-r--r-- | PKGBUILD | 34 |
2 files changed, 50 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..c1f671307196 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,16 @@ +pkgbase = biobambam + pkgdesc = Bioinformatics BAM file pre-processing utilities + pkgver = 2.0.79 + pkgrel = 1 + url = https://github.com/gt1/biobambam2 + arch = x86_64 + license = GPL3 + makedepends = gcc-libs + depends = libmaus>=2.0 + provides = biobambam + conflicts = biobambam + source = https://github.com/gt1/biobambam2/archive/2.0.79-release-20171006114010.tar.gz + md5sums = 534458a7b22e37bfd4b5b6e9c590553f + +pkgname = biobambam + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..e7e108c292ca --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,34 @@ +# Maintainer: Clint Valentine <valentine.clint@gmail.com> + +pkgname=biobambam +pkgver=2.0.79 +pkgrel=1 +release=20171006114010 +pkgdesc="Bioinformatics BAM file pre-processing utilities" +arch=('x86_64') +url="https://github.com/gt1/biobambam2" +license=('GPL3') +depends=('libmaus>=2.0') +makedepends=('gcc-libs') +provides=('biobambam') +conflicts=('biobambam') +source=("https://github.com/gt1/${pkgname}2/archive/${pkgver}-release-${release}.tar.gz") +md5sums=('534458a7b22e37bfd4b5b6e9c590553f') +MAKEFLAGS="-j$(nproc)" + +build() +{ + cd "${srcdir}/${pkgname}2-${pkgver}-release-${release}" + ./configure \ + --prefix="${pkgdir}/usr" +} + +check() { + cd "${srcdir}/${pkgname}2-${pkgver}-release-${release}" + make test +} + +package() { + cd "${srcdir}/${pkgname}2-${pkgver}-release-${release}" + make install +} |