diff options
| author | Stick | 2017-11-17 14:33:25 -0600 |
|---|---|---|
| committer | Stick | 2017-11-17 14:33:25 -0600 |
| commit | c839d33b991c81f4f90b6459e82ad770b7a73b2e (patch) | |
| tree | 6c3d9858bc96bb028f8f98c4978c04cac4293d67 | |
| parent | 8cd75658eca30ccbca3ac7ac76b7c7b48b3af7b2 (diff) | |
| download | aur-c839d33b991c81f4f90b6459e82ad770b7a73b2e.tar.gz | |
update to 2.7.1; new maintainer
| -rw-r--r-- | .SRCINFO | 18 | ||||
| -rw-r--r-- | PKGBUILD | 50 |
2 files changed, 33 insertions, 35 deletions
@@ -1,30 +1,28 @@ # Generated by mksrcinfo v8 -# Tue Jan 5 21:22:57 UTC 2016 +# Fri Nov 17 20:33:07 UTC 2017 pkgbase = blast+ - pkgdesc = finds regions of similarity between biological sequences - pkgver = 2.3.0 + pkgdesc = BLAST tool suite from NCBI (blastn, blastp, blastx, psiblast, etc) + pkgver = 2.7.1 pkgrel = 1 url = http://blast.ncbi.nlm.nih.gov/ arch = i686 arch = x86_64 license = custom makedepends = cpio - depends = lzo2 + depends = lmdb + depends = lzo depends = pcre depends = python provides = blast - provides = blast+-bin - provides = ncbi-blast - provides = ncbi-blast+ + provides = blast+-binncbi-blast conflicts = blast conflicts = blast+-bin conflicts = ncbi-blast - conflicts = ncbi-blast+ conflicts = cddlib conflicts = proj replaces = ncbi-blast - source = ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.3.0/ncbi-blast-2.3.0+-src.tar.gz - md5sums = 0f252f0edf6c92e18012622fc93083b0 + source = ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-src.tar.gz + sha512sums = e4b3914f51165ae4c82051068ed9d3470687a4e0f1df6274018c0ba14b241666a570d72265c7d167b8ce2a9075652744244a00e3e95c00c4252da0fbd80d17c6 pkgname = blast+ @@ -1,40 +1,40 @@ -# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com> +# Maintainer: Nathaniel Stickney <nstickney@gmail.com> +# Contributor: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com> +# shellcheck disable=SC2034,SC2148,SC2154 pkgname=blast+ -pkgver=2.3.0 +pkgver=2.7.1 pkgrel=1 -pkgdesc="finds regions of similarity between biological sequences" +pkgdesc="BLAST tool suite from NCBI (blastn, blastp, blastx, psiblast, etc)" arch=('i686' 'x86_64') url="http://blast.ncbi.nlm.nih.gov/" license=('custom') -depends=('lzo2' 'pcre' 'python') +depends=('lmdb' 'lzo' 'pcre' 'python') makedepends=('cpio') -conflicts=('blast' 'blast+-bin' 'ncbi-blast' 'ncbi-blast+' 'cddlib' 'proj') -provides=('blast' 'blast+-bin' 'ncbi-blast' 'ncbi-blast+') +conflicts=('blast' 'blast+-bin' 'ncbi-blast' 'cddlib' 'proj') +provides=('blast' 'blast+-bin''ncbi-blast') replaces=('ncbi-blast') source=("ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/$pkgver/ncbi-blast-$pkgver+-src.tar.gz") -md5sums=('0f252f0edf6c92e18012622fc93083b0') +sha512sums=('e4b3914f51165ae4c82051068ed9d3470687a4e0f1df6274018c0ba14b241666a570d72265c7d167b8ce2a9075652744244a00e3e95c00c4252da0fbd80d17c6') + +prepare() { + cd $srcdir/ncbi-blast-$pkgver+-src/c++ + ./configure \ + --prefix=/usr \ + --with-dll \ + --with-mt \ + --without-gnutls +} build() { - cd $srcdir/ncbi-blast-$pkgver+-src/c++ - - ./configure \ - --prefix=/usr \ - --with-dll \ - --with-mt \ - --without-gnutls - - make + cd $srcdir/ncbi-blast-$pkgver+-src/c++ + make } package() { - cd $srcdir/ncbi-blast-$pkgver+-src/c++ - - make prefix=$pkgdir/usr install - - chmod +x $pkgdir/usr/lib/*.so - - install -d $pkgdir/usr/share/licenses/$pkgname - - echo 'public domain' > $pkgdir/usr/share/licenses/$pkgname/LICENSE + cd $srcdir/ncbi-blast-$pkgver+-src/c++ + make prefix=$pkgdir/usr install + chmod +x $pkgdir/usr/lib/*.so + install -d $pkgdir/usr/share/licenses/$pkgname + echo 'public domain' > $pkgdir/usr/share/licenses/$pkgname/LICENSE } |