diff options
| author | Chocobo1 | 2020-10-26 14:37:43 +0800 |
|---|---|---|
| committer | Chocobo1 | 2020-10-26 14:51:11 +0800 |
| commit | 644b4877c37806ec42556651bcb58cbbbba08043 (patch) | |
| tree | 3991a855b39e122e0f89509f78821eb3dc59bd54 | |
| download | aur-644b4877c37806ec42556651bcb58cbbbba08043.tar.gz | |
newpkg: bowtie2-bin 2.4.2-1
| -rw-r--r-- | .SRCINFO | 20 | ||||
| -rw-r--r-- | PKGBUILD | 28 |
2 files changed, 48 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..1b07505d8c27 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,20 @@ +pkgbase = bowtie2-bin + pkgdesc = Tool for aligning sequencing reads to long reference sequences + pkgver = 2.4.2 + pkgrel = 1 + url = http://bowtie-bio.sourceforge.net/bowtie2/index.shtml + arch = x86_64 + arch = aarch64 + license = GPL + depends = glibc + optdepends = perl + optdepends = python + provides = bowtie2 + conflicts = bowtie2 + source_x86_64 = https://github.com/BenLangmead/bowtie2/releases/download/v2.4.2/bowtie2-2.4.2-linux-x86_64.zip + sha256sums_x86_64 = e8e63299320708d0a98b19e48a3b1c32fb3de809d4c2ca6c8f320126deea862e + source_aarch64 = https://github.com/BenLangmead/bowtie2/releases/download/v2.4.2/bowtie2-2.4.2-linux-aarch64.zip + sha256sums_aarch64 = 64fdd108825738766c5a700036aeebd4ed2db404228538741bdd93476a20fd2a + +pkgname = bowtie2-bin + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..b833c268d551 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,28 @@ +# Maintainer: Chocobo1 <chocobo1 AT archlinux DOT net> + +pkgname=bowtie2-bin +pkgver=2.4.2 +pkgrel=1 +pkgdesc="Tool for aligning sequencing reads to long reference sequences" +arch=('x86_64' 'aarch64') +url="http://bowtie-bio.sourceforge.net/bowtie2/index.shtml" +license=('GPL') +depends=('glibc') +optdepends=('perl' 'python') +provides=('bowtie2') +conflicts=('bowtie2') +source_x86_64=("https://github.com/BenLangmead/bowtie2/releases/download/v$pkgver/bowtie2-$pkgver-linux-x86_64.zip") +source_aarch64=("https://github.com/BenLangmead/bowtie2/releases/download/v$pkgver/bowtie2-$pkgver-linux-aarch64.zip") +sha256sums_x86_64=('e8e63299320708d0a98b19e48a3b1c32fb3de809d4c2ca6c8f320126deea862e') +sha256sums_aarch64=('64fdd108825738766c5a700036aeebd4ed2db404228538741bdd93476a20fd2a') + + +package() { + cd "bowtie2-$pkgver-linux-$CARCH" + + install -Dm755 bowtie2{,-*} -t "$pkgdir/usr/bin" + rm "$pkgdir/usr/bin"/*-debug + + install -Dm644 {MANUAL,MANUAL.markdown,TUTORIAL} -t "$pkgdir/usr/share/doc/bowtie2" + install -Dm644 "doc"/* -t "$pkgdir/usr/share/doc/bowtie2/doc" +} |