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| author | bipin kumar | 2023-08-05 00:22:52 +0530 |
|---|---|---|
| committer | bipin kumar | 2023-08-05 00:22:52 +0530 |
| commit | 7f886ccacef4e7d57ffbd62be8113a23dcdfad32 (patch) | |
| tree | 4db3314fcfbf30b5cbb9c5e362eb21fa2ff85aa4 | |
| download | aur-7f886ccacef4e7d57ffbd62be8113a23dcdfad32.tar.gz | |
cramino ver 0.9.9
| -rw-r--r-- | .SRCINFO | 18 | ||||
| -rw-r--r-- | PKGBUILD | 39 |
2 files changed, 57 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..fd4910da1d4c --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,18 @@ +pkgbase = cramino + pkgdesc = A fast tool for BAM/CRAM quality evaluation of long reads. https://doi.org/10.1093/bioinformatics/btad311 + pkgver = 0.9.9 + pkgrel = 1 + url = https://github.com/wdecoster/cramino + arch = x86_64 + license = MIT + makedepends = git + makedepends = rust + makedepends = cmake + depends = gcc-libs + depends = glibc + depends = bzip2 + options = !lto + source = cramino-0.9.9.tar.gz::https://github.com/wdecoster/cramino/archive/refs/tags/v0.9.9.tar.gz + sha256sums = 4892fcee0a5b4b0b7c49ed4f5f54168a15d5c0419e3eacee0d6155a207e194a1 + +pkgname = cramino diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..d4dacceab226 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,39 @@ +# Maintainer: bipin kumar <kbipinkumar@pm.me> +pkgname=cramino +pkgver=0.9.9 +pkgrel=1 +pkgdesc='A fast tool for BAM/CRAM quality evaluation of long reads. https://doi.org/10.1093/bioinformatics/btad311' +arch=(x86_64) +depends=('gcc-libs' 'glibc' 'bzip2') +makedepends=('git' 'rust' 'cmake') +url='https://github.com/wdecoster/cramino' +license=('MIT') +options=(!lto) +source=(${pkgname}-${pkgver}.tar.gz::https://github.com/wdecoster/cramino/archive/refs/tags/v${pkgver}.tar.gz) +sha256sums=('4892fcee0a5b4b0b7c49ed4f5f54168a15d5c0419e3eacee0d6155a207e194a1') + +prepare() { + cd ${pkgname}-${pkgver} + export RUSTUP_TOOLCHAIN=stable + cargo fetch --target "$CARCH-unknown-linux-gnu" +} + +build() { + cd ${pkgname}-${pkgver} + export RUSTUP_TOOLCHAIN=stable + export CARGO_TARGET_DIR=target + cargo build --frozen --release --all-features +} + +check() { + cd ${pkgname}-${pkgver} + export RUSTUP_TOOLCHAIN=stable + cargo test --frozen --all-features +} + +package() { + cd ${pkgname}-${pkgver} + install -Dm0755 -t "$pkgdir/usr/bin/" "target/release/$pkgname" + install -Dm644 LICENSE -t "$pkgdir/usr/share/licenses/$pkgname" +} + |