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author | Martino Pilia | 2018-08-11 16:35:37 +0200 |
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committer | Martino Pilia | 2018-08-11 16:35:37 +0200 |
commit | 390fee882778f0bbe1686c64e079a83704a75bf4 (patch) | |
tree | 7c673ac963acb9c9b310859099cc7980fa3abb50 | |
parent | f9c90064c52f257cba0a9074687c502aa425b872 (diff) | |
download | aur-390fee882778f0bbe1686c64e079a83704a75bf4.tar.gz |
fixes in the build config
-rw-r--r-- | .SRCINFO | 2 | ||||
-rw-r--r-- | PKGBUILD | 170 |
2 files changed, 85 insertions, 87 deletions
@@ -1,7 +1,7 @@ pkgbase = elastix pkgdesc = Toolbox for rigid and nonrigid registration of images pkgver = 4.9.0 - pkgrel = 3 + pkgrel = 4 url = http://elastix.isi.uu.nl/ arch = x86_64 license = apache @@ -1,7 +1,7 @@ # Maintainer of this PKBGUILD file: Martino Pilia <martino.pilia@gmail.com> pkgname=elastix pkgver=4.9.0 -pkgrel=3 +pkgrel=4 pkgdesc='Toolbox for rigid and nonrigid registration of images' arch=('x86_64') url='http://elastix.isi.uu.nl/' @@ -23,97 +23,95 @@ prepare() { cmake \ -DCMAKE_INSTALL_PREFIX:PATH="/usr" \ -DCMAKE_BUILD_TYPE:STRING=Release \ - -DMAKE_CXX_FLAGS:STRING="--std=c++11" \ + -DCMAKE_CXX_FLAGS:STRING="--std=c++11" \ -DBUILD_TESTING:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ - -DELASTIX_IMAGE_2D_PIXELTYPES:STRING="short;float" \ - -DELASTIX_IMAGE_3D_PIXELTYPES:STRING="short;float" \ - -DELASTIX_IMAGE_4D_PIXELTYPES:STRING="short;float" \ + -DELASTIX_IMAGE_2D_PIXELTYPES:STRING="unsigned char;short;float" \ + -DELASTIX_IMAGE_3D_PIXELTYPES:STRING="unsigned char;short;float" \ + -DELASTIX_IMAGE_4D_PIXELTYPES:STRING="unsigned char;short;float" \ -DELASTIX_BUILD_EXECUTABLE:BOOL=ON \ - -DELASTIX_USE_ALL_COMPONENTS:BOOL=OFF \ -DELASTIX_USE_OPENCL:BOOL=OFF \ -DELASTIX_USE_OPENMP:BOOL=OFF \ -DELASTIX_USE_EIGEN:BOOL=OFF \ - -DELASTIX_USE_OPENCL:BOOL=OFF \ - -DELASTIX_USE_AdaptiveStochasticGradientDescent:BOOL=ON \ - -DELASTIX_USE_AdvancedAffineTransformElastix:BOOL=ON \ - -DELASTIX_USE_AdvancedBSplineTransform:BOOL=ON \ - -DELASTIX_USE_AdvancedKappaStatisticMetric:BOOL=ON \ - -DELASTIX_USE_AdvancedMattesMutualInformationMetric:BOOL=ON \ - -DELASTIX_USE_AdvancedMeanSquaresMetric:BOOL=ON \ - -DELASTIX_USE_AdvancedNormalizedCorrelationMetric:BOOL=ON \ - -DELASTIX_USE_AffineDTITransformElastix:BOOL=ON \ - -DELASTIX_USE_AffineLogTransformElastix:BOOL=OFF \ - -DELASTIX_USE_BSplineInterpolator:BOOL=ON \ - -DELASTIX_USE_BSplineInterpolatorFloat:BOOL=ON \ - -DELASTIX_USE_BSplineResampleInterpolator:BOOL=ON \ - -DELASTIX_USE_BSplineResampleInterpolatorFloat:BOOL=ON \ - -DELASTIX_USE_BSplineStackTransform:BOOL=ON \ - -DELASTIX_USE_BSplineTransformWithDiffusion:BOOL=ON \ - -DELASTIX_USE_CMAEvolutionStrategy:BOOL=ON \ - -DELASTIX_USE_CUDAResampler:BOOL=OFF \ - -DELASTIX_USE_ConjugateGradient:BOOL=ON \ - -DELASTIX_USE_ConjugateGradientFRPR:BOOL=ON \ - -DELASTIX_USE_CorrespondingPointsEuclideanDistanceMetric:BOOL=ON \ - -DELASTIX_USE_DeformationFieldTransform:BOOL=ON \ - -DELASTIX_USE_DisplacementMagnitudePenalty:BOOL=ON \ - -DELASTIX_USE_DistancePreservingRigidityPenalty:BOOL=ON \ - -DELASTIX_USE_EulerTransformElastix:BOOL=ON \ - -DELASTIX_USE_FiniteDifferenceGradientDescent:BOOL=ON \ - -DELASTIX_USE_FixedGenericPyramid:BOOL=ON \ - -DELASTIX_USE_FixedRecursivePyramid:BOOL=ON \ - -DELASTIX_USE_FixedShrinkingPyramid:BOOL=ON \ - -DELASTIX_USE_FixedSmoothingPyramid:BOOL=ON \ - -DELASTIX_USE_FullSampler:BOOL=ON \ - -DELASTIX_USE_FullSearch:BOOL=ON \ - -DELASTIX_USE_GradientDifferenceMetric:BOOL=ON \ - -DELASTIX_USE_GridSampler:BOOL=ON \ - -DELASTIX_USE_KNNGraphAlphaMutualInformationMetric:BOOL=OFF \ - -DELASTIX_USE_LinearInterpolator:BOOL=ON \ - -DELASTIX_USE_LinearResampleInterpolator:BOOL=ON \ - -DELASTIX_USE_MissingStructurePenalty:BOOL=ON \ - -DELASTIX_USE_MovingRecursivePyramid:BOOL=ON \ - -DELASTIX_USE_MovingShrinkingPyramid:BOOL=ON \ - -DELASTIX_USE_MovingSmoothingPyramid:BOOL=ON \ - -DELASTIX_USE_MultiBSplineTransformWithNormal:BOOL=ON \ - -DELASTIX_USE_MultiInputRandomCoordinateSampler:BOOL=ON \ - -DELASTIX_USE_MultiMetricMultiResolutionRegistration:BOOL=ON \ - -DELASTIX_USE_MultiResolutionRegistration:BOOL=ON \ - -DELASTIX_USE_MultiResolutionRegistrationWithFeatures:BOOL=ON \ - -DELASTIX_USE_MutualInformationHistogramMetric:BOOL=ON \ - -DELASTIX_USE_MyStandardResampler:BOOL=ON \ - -DELASTIX_USE_NearestNeighborInterpolator:BOOL=ON \ - -DELASTIX_USE_NearestNeighborResampleInterpolator:BOOL=ON \ - -DELASTIX_USE_NormalizedGradientCorrelationMetric:BOOL=ON \ - -DELASTIX_USE_NormalizedMutualInformationMetric:BOOL=ON \ - -DELASTIX_USE_OpenCLFixedGenericPyramid:BOOL=OFF \ - -DELASTIX_USE_OpenCLMovingGenericPyramid:BOOL=OFF \ - -DELASTIX_USE_OpenCLResampler:BOOL=OFF \ - -DELASTIX_USE_PatternIntensityMetric:BOOL=ON \ - -DELASTIX_USE_PolydataDummyPenalty:BOOL=ON \ - -DELASTIX_USE_Powell:BOOL=ON \ - -DELASTIX_USE_QuasiNewtonLBFGS:BOOL=ON \ - -DELASTIX_USE_RSGDEachParameterApart:BOOL=ON \ - -DELASTIX_USE_RandomCoordinateSampler:BOOL=ON \ - -DELASTIX_USE_RandomSampler:BOOL=ON \ - -DELASTIX_USE_RandomSamplerSparseMask:BOOL=ON \ - -DELASTIX_USE_RayCastInterpolator:BOOL=ON \ - -DELASTIX_USE_RayCastResampleInterpolator:BOOL=ON \ - -DELASTIX_USE_ReducedDimensionBSplineInterpolator:BOOL=ON \ - -DELASTIX_USE_ReducedDimensionBSplineResampleInterpolator:BOOL=ON \ - -DELASTIX_USE_RegularStepGradientDescent:BOOL=ON \ - -DELASTIX_USE_SimilarityTransformElastix:BOOL=ON \ - -DELASTIX_USE_Simplex:BOOL=ON \ - -DELASTIX_USE_SimultaneousPerturbation:BOOL=ON \ - -DELASTIX_USE_SplineKernelTransform:BOOL=ON \ - -DELASTIX_USE_StandardGradientDescent:BOOL=ON \ - -DELASTIX_USE_StatisticalShapePenalty:BOOL=ON \ - -DELASTIX_USE_TransformBendingEnergyPenanalty:BOOL=ON \ - -DELASTIX_USE_TransformRigidityPenalty:BOOL=ON \ - -DELASTIX_USE_TranslationTransformElastix:BOOL=ON \ - -DELASTIX_USE_VarianceOverLastDimensionMetric:BOOL=ON \ - -DELASTIX_USE_ViolaWellsMutualInformationMetric:BOOL=ON \ - -DELASTIX_USE_WeightedCombinationTransformElastix:BOOL=ON \ + -DUSE_ALL_COMPONENTS:BOOL=OFF \ + -DUSE_AdaptiveStochasticGradientDescent:BOOL=ON \ + -DUSE_AdvancedAffineTransformElastix:BOOL=ON \ + -DUSE_AdvancedBSplineTransform:BOOL=ON \ + -DUSE_AdvancedKappaStatisticMetric:BOOL=ON \ + -DUSE_AdvancedMattesMutualInformationMetric:BOOL=ON \ + -DUSE_AdvancedMeanSquaresMetric:BOOL=ON \ + -DUSE_AdvancedNormalizedCorrelationMetric:BOOL=ON \ + -DUSE_AffineDTITransformElastix:BOOL=ON \ + -DUSE_AffineLogTransformElastix:BOOL=OFF \ + -DUSE_BSplineInterpolator:BOOL=ON \ + -DUSE_BSplineInterpolatorFloat:BOOL=ON \ + -DUSE_BSplineResampleInterpolator:BOOL=ON \ + -DUSE_BSplineResampleInterpolatorFloat:BOOL=ON \ + -DUSE_BSplineStackTransform:BOOL=ON \ + -DUSE_BSplineTransformWithDiffusion:BOOL=ON \ + -DUSE_CMAEvolutionStrategy:BOOL=ON \ + -DUSE_ConjugateGradient:BOOL=ON \ + -DUSE_ConjugateGradientFRPR:BOOL=ON \ + -DUSE_CorrespondingPointsEuclideanDistanceMetric:BOOL=ON \ + -DUSE_DeformationFieldTransform:BOOL=ON \ + -DUSE_DisplacementMagnitudePenalty:BOOL=ON \ + -DUSE_DistancePreservingRigidityPenalty:BOOL=ON \ + -DUSE_EulerTransformElastix:BOOL=ON \ + -DUSE_FiniteDifferenceGradientDescent:BOOL=ON \ + -DUSE_FixedGenericPyramid:BOOL=ON \ + -DUSE_FixedRecursivePyramid:BOOL=ON \ + -DUSE_FixedShrinkingPyramid:BOOL=ON \ + -DUSE_FixedSmoothingPyramid:BOOL=ON \ + -DUSE_FullSampler:BOOL=ON \ + -DUSE_FullSearch:BOOL=ON \ + -DUSE_GradientDifferenceMetric:BOOL=ON \ + -DUSE_GridSampler:BOOL=ON \ + -DUSE_KNNGraphAlphaMutualInformationMetric:BOOL=OFF \ + -DUSE_LinearInterpolator:BOOL=ON \ + -DUSE_LinearResampleInterpolator:BOOL=ON \ + -DUSE_MissingStructurePenalty:BOOL=ON \ + -DUSE_MovingRecursivePyramid:BOOL=ON \ + -DUSE_MovingShrinkingPyramid:BOOL=ON \ + -DUSE_MovingSmoothingPyramid:BOOL=ON \ + -DUSE_MultiBSplineTransformWithNormal:BOOL=ON \ + -DUSE_MultiInputRandomCoordinateSampler:BOOL=ON \ + -DUSE_MultiMetricMultiResolutionRegistration:BOOL=ON \ + -DUSE_MultiResolutionRegistration:BOOL=ON \ + -DUSE_MultiResolutionRegistrationWithFeatures:BOOL=ON \ + -DUSE_MutualInformationHistogramMetric:BOOL=ON \ + -DUSE_MyStandardResampler:BOOL=ON \ + -DUSE_NearestNeighborInterpolator:BOOL=ON \ + -DUSE_NearestNeighborResampleInterpolator:BOOL=ON \ + -DUSE_NormalizedGradientCorrelationMetric:BOOL=ON \ + -DUSE_NormalizedMutualInformationMetric:BOOL=ON \ + -DUSE_OpenCLFixedGenericPyramid:BOOL=OFF \ + -DUSE_OpenCLMovingGenericPyramid:BOOL=OFF \ + -DUSE_OpenCLResampler:BOOL=OFF \ + -DUSE_PatternIntensityMetric:BOOL=ON \ + -DUSE_PolydataDummyPenalty:BOOL=ON \ + -DUSE_Powell:BOOL=ON \ + -DUSE_QuasiNewtonLBFGS:BOOL=ON \ + -DUSE_RSGDEachParameterApart:BOOL=ON \ + -DUSE_RandomCoordinateSampler:BOOL=ON \ + -DUSE_RandomSampler:BOOL=ON \ + -DUSE_RandomSamplerSparseMask:BOOL=ON \ + -DUSE_RayCastInterpolator:BOOL=ON \ + -DUSE_RayCastResampleInterpolator:BOOL=ON \ + -DUSE_ReducedDimensionBSplineInterpolator:BOOL=ON \ + -DUSE_ReducedDimensionBSplineResampleInterpolator:BOOL=ON \ + -DUSE_RegularStepGradientDescent:BOOL=ON \ + -DUSE_SimilarityTransformElastix:BOOL=ON \ + -DUSE_Simplex:BOOL=ON \ + -DUSE_SimultaneousPerturbation:BOOL=ON \ + -DUSE_SplineKernelTransform:BOOL=ON \ + -DUSE_StandardGradientDescent:BOOL=ON \ + -DUSE_StatisticalShapePenalty:BOOL=ON \ + -DUSE_TransformBendingEnergyPenalty:BOOL=ON \ + -DUSE_TransformRigidityPenalty:BOOL=ON \ + -DUSE_TranslationTransformElastix:BOOL=ON \ + -DUSE_VarianceOverLastDimensionMetric:BOOL=ON \ + -DUSE_ViolaWellsMutualInformationMetric:BOOL=ON \ + -DUSE_WeightedCombinationTransformElastix:BOOL=ON \ .. } |