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authorKuoi2024-02-15 01:39:47 +0800
committerKuoi2024-02-15 01:39:47 +0800
commite182cfac67da56941604c8c6257f0832ff940622 (patch)
tree64738223cc1dd48bf6c84a6ceaf983ceaf7ef5e1
downloadaur-e182cfac67da56941604c8c6257f0832ff940622.tar.gz
init
-rw-r--r--.SRCINFO13
-rw-r--r--PKGBUILD26
2 files changed, 39 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..95b3b228d4d0
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,13 @@
+pkgbase = fastuniq
+ pkgdesc = ultrafast de novo tool for removal of duplicates in paired short DNA sequence reads in FASTQ format https://doi.org/10.1371/journal.pone.0052249
+ pkgver = 1.1
+ pkgrel = 0
+ url = https://sourceforge.net/projects/fastuniq/
+ arch = x86_64
+ license = LicenseRef-unknown
+ makedepends = make
+ depends = glibc
+ source = fastuniq-1.1.tar.gz::https://sourceforge.net/projects/fastuniq/files/FastUniq-1.1.tar.gz/download
+ sha256sums = 9ebf251566d097226393fb5aa9db30a827e60c7a4bd9f6e06022b4af4cee0eae
+
+pkgname = fastuniq
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..bd2ac83df4e4
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,26 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+pkgname=fastuniq
+_pkgname=FastUniq
+pkgver=1.1
+pkgrel=0
+pkgdesc="ultrafast de novo tool for removal of duplicates in paired
+short DNA sequence reads in FASTQ format \
+ https://doi.org/10.1371/journal.pone.0052249"
+arch=('x86_64')
+url="https://sourceforge.net/projects/fastuniq/"
+license=('LicenseRef-unknown')
+depends=('glibc')
+makedepends=('make')
+source=($pkgname-$pkgver.tar.gz::https://sourceforge.net/projects/fastuniq/files/FastUniq-${pkgver}.tar.gz/download)
+sha256sums=('9ebf251566d097226393fb5aa9db30a827e60c7a4bd9f6e06022b4af4cee0eae')
+build() {
+ cd $srcdir/$_pkgname/source
+ make
+}
+
+package() {
+ cd $srcdir/$_pkgname
+ install -Dm 644 README.txt ${pkgdir}/usr/share/doc/${pkgname}/README.txt
+ cd $srcdir/$_pkgname/source
+ install -Dm755 $pkgname $pkgdir/usr/bin/$pkgname
+}