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| author | Rhinoceros | 2015-06-08 23:57:54 +1000 |
|---|---|---|
| committer | Rhinoceros | 2015-06-08 23:57:54 +1000 |
| commit | 82a93edfae5cc54f6301bdb3379fe7a455f39ac6 (patch) | |
| tree | 826ad86bf29d85777cda0b01dace98d7a9e09293 | |
| download | aur-82a93edfae5cc54f6301bdb3379fe7a455f39ac6.tar.gz | |
Initial commit of 1.4.2-1
* Originally submitted by Alexandre G <alex foo lecairn bar org>
| -rw-r--r-- | .SRCINFO | 16 | ||||
| -rw-r--r-- | PKGBUILD | 41 | ||||
| -rwxr-xr-x | figtree | 4 |
3 files changed, 61 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..6f68b60a46c7 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,16 @@ +pkgbase = figtree + pkgdesc = Phylogenetic tree viewer + pkgver = 1.4.2 + pkgrel = 1 + url = http://tree.bio.ed.ac.uk + arch = any + license = GPL2 + makedepends = unzip + depends = java-environment + source = figtree-1.4.2.zip::http://tree.bio.ed.ac.uk/download.php?id=90&num=2 + source = figtree + md5sums = d3b858120612041a3f1f44ce610875b0 + md5sums = 917be0a986ce83ff16f80833c60bf73a + +pkgname = figtree + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..6c8bb6053f84 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,41 @@ +# Maintainer: Alexandre G <alex foo lecairn bar org> +pkgname=figtree +pkgver=1.4.2 +pkgrel=1 +pkgdesc="Phylogenetic tree viewer" +arch=('any') +url="http://tree.bio.ed.ac.uk" +license=('GPL2') # as stated in http://code.google.com/p/figtree/ +groups=() +depends=('java-environment') +makedepends=('unzip') +optdepends=() +provides=() +conflicts=() +replaces=() +backup=() +options=() +install= +changelog= +source=("$pkgname-$pkgver.zip::http://tree.bio.ed.ac.uk/download.php?id=90&num=2" "figtree") +noextract=() +md5sums=('d3b858120612041a3f1f44ce610875b0' '917be0a986ce83ff16f80833c60bf73a') + +build() { + _figdir="${srcdir}/FigTree_v${pkgver}" + cd ${srcdir} + unzip -o "${pkgname}-${pkgver}.zip" + +} + +package() { + _figdir="${srcdir}/FigTree v${pkgver}" + + install -D "./figtree" "${pkgdir}/usr/bin/figtree" + install -D "${_figdir}/lib/figtree.jar" "${pkgdir}/usr/share/figtree/lib/figtree.jar" + + # Install doc and examples + install -D "${_figdir}/carnivore.tree" "${pkgdir}/usr/share/doc/figtree/examples/carnivore.tree" + install -D "${_figdir}/influenza.tree" "${pkgdir}/usr/share/doc/figtree/examples/influenza.tree" + install -D "${_figdir}/README.txt" "${pkgdir}/usr/share/doc/figtree/README.txt" +} diff --git a/figtree b/figtree new file mode 100755 index 000000000000..9b545dbb7caf --- /dev/null +++ b/figtree @@ -0,0 +1,4 @@ +#!/bin/sh + +java -Xms64m -Xmx512m -jar /usr/share/figtree/lib/figtree.jar $* + |