First (and likely only) commit for fingerPRINTScan. This tool is used by interproscan, but is not supported anywhere.

4 files changed, 51 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..88fb88b151fb
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,14 @@
+pkgbase = fingerprintscan
+	pkgdesc = Search against FingerPRINTScan with a protein query sequence to identify the closest matching PRINTS sequence motif fingerprints in a protein sequence.
+	pkgver = 3.5.96
+	pkgrel = 1
+	url = http://130.88.97.239/PRINTS/index.php
+	arch = x86_64
+	license = LGPL
+	makedepends = gcc-libs
+	depends = gcc-libs
+	source = fingerprintscan.tgz
+	md5sums = SKIP
+
+pkgname = fingerprintscan
+
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 000000000000..1129392dfea3
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,4 @@
+*.pkg.tar.xz
+fingerprintscan/
+pkg/
+src/
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..4125b9c18a74
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,33 @@
+# Maintainer: Josh Marshall <jrmarsha@mtu.edu>
+
+pkgname=fingerprintscan
+pkgver='3.5.96'
+pkgrel=1
+pkgdesc='Search against FingerPRINTScan with a protein query sequence to identify the closest matching PRINTS sequence motif fingerprints in a protein sequence.'
+arch=('x86_64')
+license=('LGPL')
+url='http://130.88.97.239/PRINTS/index.php'
+depends=('gcc-libs')
+makedepends=('gcc-libs')
+provides=()
+source=(
+	fingerprintscan.tgz
+)
+md5sums=(
+'SKIP'
+)
+
+
+build() {
+  cd "$pkgname"
+
+  sed 's/shuffle/ShuffleFlag/g' FingerPrint.cc > FingerPrint.cc.tmp
+  mv FingerPrint.cc.tmp FingerPrint.cc
+  ./configure --exec-prefix=/usr --prefix=/usr  
+  make
+}
+
+package() {  
+  cd "$pkgname"
+  make DESTDIR="$pkgdir/" install
+}
diff --git a/fingerprintscan.tgz b/fingerprintscan.tgz
new file mode 100644
index 000000000000..494b68508d09
--- /dev/null
+++ b/fingerprintscan.tgz