diff options
| author | Stefan Seemayer | 2015-07-06 10:11:37 +0200 |
|---|---|---|
| committer | Stefan Seemayer | 2015-07-06 10:11:37 +0200 |
| commit | 9e70366ac9aea0fb714cb392276029aec748303a (patch) | |
| tree | 2eac0d47fc3885bc61d059471cde4eba61f6a408 | |
| download | aur-9e70366ac9aea0fb714cb392276029aec748303a.tar.gz | |
Initial import
| -rw-r--r-- | .SRCINFO | 16 | ||||
| -rw-r--r-- | PKGBUILD | 31 | ||||
| -rw-r--r-- | hhsuite.sh | 2 |
3 files changed, 49 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..a174537955e4 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,16 @@ +pkgbase = hhsuite + pkgdesc = A set of programs for protein sequence homology detection by iterative HMM-HMM comparison for computational biology like PSI-BLAST + pkgver = 2.0.16 + pkgrel = 2 + url = http://hhblits.genzentrum.lmu.de/ + arch = i686 + arch = x86_64 + license = GPL + depends = libpng + source = ftp://toolkit.lmb.uni-muenchen.de/pub/HH-suite/releases/hhsuite-2.0.16.tar.gz + source = hhsuite.sh + md5sums = 39f9c6ed31e49618e7868a5b81f9ddef + md5sums = fe3864b3095fa7243b67dcee0f95ba38 + +pkgname = hhsuite + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..28e4fb3178c2 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,31 @@ +# Maintainer: Stefan Seemayer <seemayer@genzentrum.lmu.de> +# Author: Andy Hauser <hauser@genzentrum.lmu.de> + +pkgname=hhsuite +pkgver=2.0.16 +pkgrel=2 +pkgdesc="A set of programs for protein sequence homology detection by iterative HMM-HMM comparison for computational biology like PSI-BLAST" +arch=('i686' 'x86_64') +url="http://hhblits.genzentrum.lmu.de/" +license=(GPL) +depends=('libpng') + +source=("ftp://toolkit.lmb.uni-muenchen.de/pub/HH-suite/releases/$pkgname-$pkgver.tar.gz" + "hhsuite.sh") +md5sums=('39f9c6ed31e49618e7868a5b81f9ddef' + 'fe3864b3095fa7243b67dcee0f95ba38') + +build() +{ + cd $srcdir/$pkgname-$pkgver/ + make all WITH_NATIVE=1 NO_PNG=1 +} + +package() +{ + cd $srcdir/$pkgname-$pkgver/ + make install INSTALL_DIR="${pkgdir}/usr" + install -Dm755 "$srcdir/hhsuite.sh" "${pkgdir}/etc/profile.d/hhsuite.sh" +} + +# vim:set ts=2 sw=2 et: diff --git a/hhsuite.sh b/hhsuite.sh new file mode 100644 index 000000000000..f638132279a3 --- /dev/null +++ b/hhsuite.sh @@ -0,0 +1,2 @@ +export HHLIB=/usr/lib/hh +export PERLLIB=$PERLLIB:/usr/lib/hh/scripts |