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author | Philipp A. | 2024-11-02 17:00:35 +0100 |
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committer | Philipp A. | 2024-11-02 17:00:35 +0100 |
commit | d504cab7b27d21c7bfa5a0dfdfd0f5f30ddab42e (patch) | |
tree | 7eee136d16120c72087acb6011aaa3e4c46f1a1c | |
parent | 9856d9a52b10f78daafef589f8686b1ac33090aa (diff) | |
download | aur-d504cab7b27d21c7bfa5a0dfdfd0f5f30ddab42e.tar.gz |
upgpkg: hisat2 2.2.1-2
Update hisat2 website
-rw-r--r-- | .SRCINFO | 15 | ||||
-rw-r--r-- | PKGBUILD | 17 |
2 files changed, 19 insertions, 13 deletions
@@ -1,13 +1,14 @@ pkgbase = hisat2 pkgdesc = A fast and sensitive alignment program for mapping next-generation sequencing reads against genomes pkgver = 2.2.1 - pkgrel = 1 - url = https://ccb.jhu.edu/software/hisat2 + pkgrel = 2 + url = https://daehwankimlab.github.io/hisat2 arch = x86_64 - license = GPL3 - optdepends = python: To use the wrapper scripts instead of -l and -s variants - source = hisat2-2.2.1-source.zip::https://cloud.biohpc.swmed.edu/index.php/s/fE9QCsX3NH4QwBi/download - sha256sums = 48e933330d4d8470d2b3dfe7ec3918f2e98a75f7381891e23b7df1fb4f135eb1 + license = GPL-3.0-only + depends = perl + optdepends = perl: To use the `hisat2` wrapper script + optdepends = python: To use the `hisat2-{build,build-new,inspect}` scripts + source = hisat2-2.2.1.tar.gz::https://github.com/DaehwanKimLab/hisat2/archive/refs/tags/v2.2.1.tar.gz + sha256sums = f3f4f867d0a6b1f880d64efc19deaa5788c62050e0a4d614ce98b3492f702599 pkgname = hisat2 - @@ -1,13 +1,17 @@ pkgname=hisat2 pkgver=2.2.1 -pkgrel=1 +pkgrel=2 pkgdesc='A fast and sensitive alignment program for mapping next-generation sequencing reads against genomes' -url="https://ccb.jhu.edu/software/$pkgname" -license=(GPL3) +url="https://daehwankimlab.github.io/$pkgname" +license=(GPL-3.0-only) arch=(x86_64) -optdepends=('python: To use the wrapper scripts instead of -l and -s variants') -source=("$pkgname-$pkgver-source.zip::https://cloud.biohpc.swmed.edu/index.php/s/fE9QCsX3NH4QwBi/download") -sha256sums=('48e933330d4d8470d2b3dfe7ec3918f2e98a75f7381891e23b7df1fb4f135eb1') +depends=(perl) +optdepends=( + 'perl: To use the `hisat2` wrapper script' + 'python: To use the `hisat2-{build,build-new,inspect}` scripts' +) +source=("$pkgname-$pkgver.tar.gz::https://github.com/DaehwanKimLab/$pkgname/archive/refs/tags/v$pkgver.tar.gz") +sha256sums=('f3f4f867d0a6b1f880d64efc19deaa5788c62050e0a4d614ce98b3492f702599') build() { cd "$srcdir/$pkgname-$pkgver" @@ -19,4 +23,5 @@ package() { for bin in hisat2 hisat2-*; do install -Dm755 $bin "$pkgdir/usr/bin/$bin" done + install -Dm644 LICENSE "$pkgdir/usr/share/licenses/$pkgname/LICENSE" } |