summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorGrey Christoforo2016-01-20 11:31:39 +0000
committerGrey Christoforo2016-01-20 11:31:39 +0000
commitf0324b5671c7e9853a2c1795c9086f7834012fe1 (patch)
tree65d72c04b904d665558fc0af3837012a27cc1d36
parent593dd704f9f51417b477107e3b3e4d7374c8e2be (diff)
downloadaur-f0324b5671c7e9853a2c1795c9086f7834012fe1.tar.gz
adding some depends
-rw-r--r--.SRCINFO6
-rw-r--r--PKGBUILD4
2 files changed, 7 insertions, 3 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 2c34ee32592e..c7700747c3f3 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,5 +1,5 @@
# Generated by mksrcinfo v8
-# Wed Jan 20 11:18:38 UTC 2016
+# Wed Jan 20 11:31:34 UTC 2016
pkgbase = homer
pkgdesc = Hypergeometric Optimization of Motif EnRichment
pkgver = 4.8
@@ -9,8 +9,10 @@ pkgbase = homer
arch = x86_64
license = GPLv3
depends = perl
- depends = ghostscript
+ depends = weblogo
depends = wget
+ optdepends = ucsc-kent-genome-tools: for the blat tool, required for removing redundant sequences during motif finding
+ optdepends = ghostscript: required for making motif logos
source = http://homer.salk.edu/homer/configureHomer.pl
md5sums = f0f52cfe22bfe341532a11d947aac803
diff --git a/PKGBUILD b/PKGBUILD
index 150e39f0f3d8..473e8b21ca75 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -7,7 +7,9 @@ pkgdesc="Hypergeometric Optimization of Motif EnRichment"
url="http://homer.salk.edu/"
arch=('i686' 'x86_64')
license=('GPLv3')
-depends=('perl' 'ghostscript' 'wget')
+optdepends=('ucsc-kent-genome-tools: for the blat tool, required for removing redundant sequences during motif finding'
+ 'ghostscript: required for making motif logos')
+depends=('perl' 'weblogo' 'wget')
source=("http://homer.salk.edu/homer/configureHomer.pl")
md5sums=('f0f52cfe22bfe341532a11d947aac803')
#options=(!strip docs libtool emptydirs !zipman staticlibs !upx)