initial commit: htscodecs

2 files changed, 40 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..67468d60b3bb
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,15 @@
+pkgbase = htscodecs
+	pkgdesc = Custom compression for sequencing formats, e.g. CRAM
+	pkgver = 0.5
+	pkgrel = 1
+	url = https://github.com/jkbonfield/htscodecs
+	arch = i686
+	arch = x86_64
+	license = BSD
+	depends = bzip2
+	depends = zlib
+	source = htscodecs-0.5.tar.gz::https://github.com/jkbonfield/htscodecs/archive/v0.5.tar.gz
+	sha256sums = bac6883e37b474ad8ce04d61204f513301eb884aaaf5f4e6d69c4e9fb3368328
+
+pkgname = htscodecs
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..fd95dcf420e8
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,25 @@
+# Maintainer: Michael Schubert <mschu.dev at gmail>
+pkgname=htscodecs
+pkgver=0.5
+_pkgver=${pkgver//./-}
+pkgrel=1
+pkgdesc="Custom compression for sequencing formats, e.g. CRAM"
+arch=('i686' 'x86_64')
+url="https://github.com/jkbonfield/htscodecs"
+license=('BSD')
+depends=('bzip2' 'zlib')
+source=($pkgname-$pkgver.tar.gz::https://github.com/jkbonfield/htscodecs/archive/v$pkgver.tar.gz)
+sha256sums=('bac6883e37b474ad8ce04d61204f513301eb884aaaf5f4e6d69c4e9fb3368328')
+
+build() {
+  cd "$srcdir/$pkgname-$pkgver"
+  aclocal
+  autoreconf --install
+  ./configure --prefix=/usr
+  make CFLAGS=-g 
+}
+
+package() {
+  cd "$srcdir/$pkgname-$pkgver"
+  make DESTDIR="$pkgdir" install
+}