summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorRhinoceros2022-02-10 12:39:00 +1100
committerRhinoceros2022-02-10 12:39:00 +1100
commit0a14701a930e789d62eccc0440089587b250aa10 (patch)
tree5a2c9d0eb826eaaf90b6a6b4da6f3f7e83de9a33
parent7e443437cb3f7feb7760b64c67fc3640e0b1b73f (diff)
downloadaur-0a14701a930e789d62eccc0440089587b250aa10.tar.gz
Update to 2.12.1-1
* Upstream changelog: "Account for data range thresholding when coloring coverage tracks by allele fractions -- fixes #1100"
-rw-r--r--.SRCINFO8
-rw-r--r--PKGBUILD4
2 files changed, 6 insertions, 6 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 67793fba81c4..0b177ad75ddb 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = igv
pkgdesc = High-performance visualization tool for interactive exploration of large, integrated genomic datasets. From Broad Institute.
- pkgver = 2.12.0
+ pkgver = 2.12.1
pkgrel = 1
url = http://www.broadinstitute.org/software/igv/home
arch = any
@@ -8,14 +8,14 @@ pkgbase = igv
depends = jre11-openjdk
depends = archlinux-java-run
depends = sh
- source = https://data.broadinstitute.org/igv/projects/downloads/2.12/IGV_Linux_2.12.0_WithJava.zip
+ source = https://data.broadinstitute.org/igv/projects/downloads/2.12/IGV_Linux_2.12.1_WithJava.zip
source = igv.sh
source = igv_hidpi.sh
source = igv.desktop
source = igv_hidpi.desktop
source = igv-license-2020.txt::https://raw.githubusercontent.com/igvteam/igv/master/license.txt
- source = https://raw.githubusercontent.com/igvteam/igv/v2.12.0/test/web/IGV_64.png
- sha512sums = fead8db1e6e5f90e525c2bda99c93986094dceccf0a076891f40dacbbf160e3f16ea62429b85a0a65713a4d1528088d8781b3d30ea56755d0e768a056dbff14c
+ source = https://raw.githubusercontent.com/igvteam/igv/v2.12.1/test/web/IGV_64.png
+ sha512sums = 55d76b638cc0e450755c3aa3ae75fc612f76bd77d00051836b1f51c7a2a31b547b3772e9406ea6e02a1aeaaf62310648c698837dfc414b789173342d8db7e3c2
sha512sums = 70de493d5188d6eedbd0bf7c74d41ce4829efab75e3a79b56f998326c209d0184f5d3624d6b85d01ad93f0462e785c314322ef4a9260ead6d747f1791ecbe649
sha512sums = 60c9c8c6f66259a4edafd1d58d1f1ebcda4450f7620d4c0fc987d5875c2fd531bc2a3159fcdb77975bf07002036e3544f4d301a31d1085ab24d576eea1f8adcb
sha512sums = c6bd4fc8bb7e43ee0fe9a4709e716d015c678bdd8bcb897876c267ec48441e2383aebb26b80457d2238f79546537af3409aa698544dc0043ff2c921f18126662
diff --git a/PKGBUILD b/PKGBUILD
index b91a36614cdb..c4346890e0b0 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -4,7 +4,7 @@
# Co-maintainer: Rhinoceros <https://aur.archlinux.org/account/rhinoceros>
pkgname=igv
-pkgver=2.12.0
+pkgver=2.12.1
minor_pkgver=$(<<<$pkgver sed -E 's/^([0-9]+\.[0-9]+)\..*/\1/')
_pkgver=${pkgver//_/-} # currently not needed
pkgrel=1
@@ -21,7 +21,7 @@ source=("https://data.broadinstitute.org/igv/projects/downloads/${minor_pkgver}/
"igv_hidpi.desktop"
"${pkgname}-license-2020.txt::https://raw.githubusercontent.com/igvteam/igv/master/license.txt"
"https://raw.githubusercontent.com/igvteam/igv/v${pkgver}/test/web/IGV_64.png")
-sha512sums=('fead8db1e6e5f90e525c2bda99c93986094dceccf0a076891f40dacbbf160e3f16ea62429b85a0a65713a4d1528088d8781b3d30ea56755d0e768a056dbff14c'
+sha512sums=('55d76b638cc0e450755c3aa3ae75fc612f76bd77d00051836b1f51c7a2a31b547b3772e9406ea6e02a1aeaaf62310648c698837dfc414b789173342d8db7e3c2'
'70de493d5188d6eedbd0bf7c74d41ce4829efab75e3a79b56f998326c209d0184f5d3624d6b85d01ad93f0462e785c314322ef4a9260ead6d747f1791ecbe649'
'60c9c8c6f66259a4edafd1d58d1f1ebcda4450f7620d4c0fc987d5875c2fd531bc2a3159fcdb77975bf07002036e3544f4d301a31d1085ab24d576eea1f8adcb'
'c6bd4fc8bb7e43ee0fe9a4709e716d015c678bdd8bcb897876c267ec48441e2383aebb26b80457d2238f79546537af3409aa698544dc0043ff2c921f18126662'