summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorRhinoceros2020-10-09 11:45:01 +1100
committerRhinoceros2020-10-09 11:45:01 +1100
commitc3c5a4d2a241144738c010b5f1b7db9cdfc75073 (patch)
treeb6902a00a61252723dba5d0a68d0585b558366f6
parent58eccb73fbbd5d3149c4816c0415f560a78263d9 (diff)
downloadaur-c3c5a4d2a241144738c010b5f1b7db9cdfc75073.tar.gz
Update to 2.8.10
* Upstream changelog: 'This release includes new download bundles for IGV. For the MacOS App and the Windows Installer, you can now choose to download a version with or without an embedded Java. If you prefer to use your own installation of Java 11, download a version labeled "Separate Java 11 required".' * Update source link and change to https * Licence also changed; give file unique name
-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD12
2 files changed, 11 insertions, 11 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 65f9e8c361da..ef59e673610a 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = igv
pkgdesc = High-performance visualization tool for interactive exploration of large, integrated genomic datasets. From Broad Institute.
- pkgver = 2.8.9
+ pkgver = 2.8.10
pkgrel = 1
url = http://www.broadinstitute.org/software/igv/home
arch = any
@@ -8,18 +8,18 @@ pkgbase = igv
depends = jre11-openjdk
depends = archlinux-java-run
depends = sh
- source = http://data.broadinstitute.org/igv/projects/downloads/2.8/IGV_Linux_2.8.9.zip
+ source = https://data.broadinstitute.org/igv/projects/downloads/2.8/IGV_Linux_2.8.10_WithJava.zip
source = igv.sh
source = igv_hidpi.sh
source = igv.desktop
source = igv_hidpi.desktop
- source = https://raw.githubusercontent.com/igvteam/igv/master/license.txt
- sha512sums = cf79680e4556777d1da446f5688f4074edae2cbb6b0df908483fb1a885957a6030c626826885aabe06aba3409de5099e0ebac9b4503cfa7d2c2df12b94e7e056
+ source = igv-license-2020.txt::https://raw.githubusercontent.com/igvteam/igv/master/license.txt
+ sha512sums = bd2419542a1f32ef91feb7433ab9893ccfd3152a70172768b41daff642cf3fdf29d63429783f93e64460c1cfa7a235096e5bc08828f427f324064118a1784f05
sha512sums = 70de493d5188d6eedbd0bf7c74d41ce4829efab75e3a79b56f998326c209d0184f5d3624d6b85d01ad93f0462e785c314322ef4a9260ead6d747f1791ecbe649
sha512sums = 60c9c8c6f66259a4edafd1d58d1f1ebcda4450f7620d4c0fc987d5875c2fd531bc2a3159fcdb77975bf07002036e3544f4d301a31d1085ab24d576eea1f8adcb
sha512sums = c6bd4fc8bb7e43ee0fe9a4709e716d015c678bdd8bcb897876c267ec48441e2383aebb26b80457d2238f79546537af3409aa698544dc0043ff2c921f18126662
sha512sums = 0d52cbd6adc2bf36f8b80acdb6d72b30d52e920b301e7af75ddee8d942c9f3467f7aa98129984ee269c6aaaacc703fb054ba2917e0d7dbce5620050623383e5b
- sha512sums = 4573a4409ce2754de2a2cf42778cfed9071858f48958f0ee41723cf3ca6dd492df4f395ddf160a41834ad044e8964e21c8e47cdad6fdfe27031a4ea3201a7a39
+ sha512sums = 6bbe15b1d5aee6754938fd8918b3679f7365dceb2a071969dd0abc85e6e2aedca24c8f7ed886fa23b7b5b547cfd1a303e6ba48a59073ef103dfddabd97d6a6a8
pkgname = igv
diff --git a/PKGBUILD b/PKGBUILD
index 118604e7697a..941f088a346c 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -4,7 +4,7 @@
# Co-maintainer: Rhinoceros <https://aur.archlinux.org/account/rhinoceros>
pkgname=igv
-pkgver=2.8.9
+pkgver=2.8.10
minor_pkgver=$(<<<$pkgver sed -E 's/^([0-9]+\.[0-9]+)\..*/\1/')
_pkgver=${pkgver//_/-} # currently not needed
pkgrel=1
@@ -14,27 +14,27 @@ url="http://www.broadinstitute.org/software/igv/home"
license=('MIT')
depends=('jre11-openjdk' 'archlinux-java-run' 'sh')
#"igv-$pkgver.tar.gz::https://github.com/igvteam/igv/archive/v$pkgver.tar.gz"
-source=("http://data.broadinstitute.org/igv/projects/downloads/${minor_pkgver}/IGV_Linux_${pkgver}.zip"
+source=("https://data.broadinstitute.org/igv/projects/downloads/${minor_pkgver}/IGV_Linux_${pkgver}_WithJava.zip"
#"http://www.broadinstitute.org/software/igv/sites/cancerinformatics.org.igv/files/images/tools.png"
"$pkgname.sh"
"igv_hidpi.sh"
"$pkgname.desktop"
"igv_hidpi.desktop"
- "https://raw.githubusercontent.com/igvteam/igv/master/license.txt")
-sha512sums=('cf79680e4556777d1da446f5688f4074edae2cbb6b0df908483fb1a885957a6030c626826885aabe06aba3409de5099e0ebac9b4503cfa7d2c2df12b94e7e056'
+ "${pkgname}-license-2020.txt::https://raw.githubusercontent.com/igvteam/igv/master/license.txt")
+sha512sums=('bd2419542a1f32ef91feb7433ab9893ccfd3152a70172768b41daff642cf3fdf29d63429783f93e64460c1cfa7a235096e5bc08828f427f324064118a1784f05'
#'e71a0dc70c717b3db00268632500b5723b8cddb1ecfbd8ce48b77ffad59bf93a8d275cc5ebd18b9eb1025200438ac55ec348def343b1b5f72a2c982b5dc4cc90'
'70de493d5188d6eedbd0bf7c74d41ce4829efab75e3a79b56f998326c209d0184f5d3624d6b85d01ad93f0462e785c314322ef4a9260ead6d747f1791ecbe649'
'60c9c8c6f66259a4edafd1d58d1f1ebcda4450f7620d4c0fc987d5875c2fd531bc2a3159fcdb77975bf07002036e3544f4d301a31d1085ab24d576eea1f8adcb'
'c6bd4fc8bb7e43ee0fe9a4709e716d015c678bdd8bcb897876c267ec48441e2383aebb26b80457d2238f79546537af3409aa698544dc0043ff2c921f18126662'
'0d52cbd6adc2bf36f8b80acdb6d72b30d52e920b301e7af75ddee8d942c9f3467f7aa98129984ee269c6aaaacc703fb054ba2917e0d7dbce5620050623383e5b'
- '4573a4409ce2754de2a2cf42778cfed9071858f48958f0ee41723cf3ca6dd492df4f395ddf160a41834ad044e8964e21c8e47cdad6fdfe27031a4ea3201a7a39')
+ '6bbe15b1d5aee6754938fd8918b3679f7365dceb2a071969dd0abc85e6e2aedca24c8f7ed886fa23b7b5b547cfd1a303e6ba48a59073ef103dfddabd97d6a6a8')
package() {
install -Dm755 $pkgname.sh "$pkgdir"/usr/bin/$pkgname
install -Dm755 "$pkgname"_hidpi.sh "$pkgdir"/usr/bin/"$pkgname"_hidpi
install -Dm644 $pkgname.desktop "$pkgdir"/usr/share/applications/$pkgname.desktop
install -Dm644 "$pkgname"_hidpi.desktop "$pkgdir"/usr/share/applications/"$pkgname"_hidpi.desktop
- install -Dm644 license.txt "${pkgdir}/usr/share/licenses/${pkgname}"
+ install -Dm644 ${pkgname}-license-2020.txt "${pkgdir}/usr/share/licenses/${pkgname}/license.txt"
cd IGV_Linux_${_pkgver}
install -Dm644 IGV_64.png "$pkgdir"/usr/share/pixmaps/$pkgname.png
install -Dm644 igv.args "$pkgdir"/usr/share/java/$pkgname/igv.args