diff options
| author | Philipp A | 2018-11-06 13:29:19 +0100 |
|---|---|---|
| committer | Philipp A | 2018-11-06 13:30:02 +0100 |
| commit | 385a7a50920dc7841b53a9dfb7d33db0dd6a867a (patch) | |
| tree | 0b3f93dfe62d5bcb027bf19a9fd110e33b5572a2 | |
| parent | 4774d0b8ab89f35b71e9f8ea44b7e616a3ae6cca (diff) | |
| download | aur-385a7a50920dc7841b53a9dfb7d33db0dd6a867a.tar.gz | |
v0.44.0
| -rw-r--r-- | .SRCINFO | 8 | ||||
| -rw-r--r-- | PKGBUILD | 12 |
2 files changed, 13 insertions, 7 deletions
@@ -1,16 +1,18 @@ pkgbase = kallisto pkgdesc = Quantify abundances of transcripts from RNA-Seq data - pkgver = 0.43.1 + pkgver = 0.44.0 pkgrel = 1 url = http://pachterlab.github.io/kallisto/ arch = i686 arch = x86_64 license = BSD makedepends = cmake + makedepends = autoconf + makedepends = automake depends = hdf5 depends = zlib - source = kallisto-0.43.1.tar.gz::https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz - md5sums = 54fc9b70ca44e4633f02c962cbc59737 + source = https://github.com/pachterlab/kallisto/archive/v0.44.0.tar.gz + sha256sums = 35a81201a56f4557697e6fe693dc6b701bbbd0a7b2b6e1c6c845ef816d67ca29 pkgname = kallisto @@ -1,16 +1,20 @@ pkgname=kallisto -pkgver=0.43.1 +pkgver=0.44.0 pkgrel=1 pkgdesc='Quantify abundances of transcripts from RNA-Seq data' url="http://pachterlab.github.io/$pkgname/" license=(BSD) arch=(i686 x86_64) depends=(hdf5 zlib) -makedepends=(cmake) -source=("$pkgname-$pkgver.tar.gz::https://github.com/pachterlab/$pkgname/archive/v$pkgver.tar.gz") -md5sums=('54fc9b70ca44e4633f02c962cbc59737') +makedepends=(cmake autoconf automake) +source=("https://github.com/pachterlab/$pkgname/archive/v$pkgver.tar.gz") +sha256sums=('35a81201a56f4557697e6fe693dc6b701bbbd0a7b2b6e1c6c845ef816d67ca29') build() { + ( + cd "$srcdir/$pkgname-$pkgver/ext/htslib" + autoreconf + ) mkdir -p build cd build cmake -DCMAKE_INSTALL_PREFIX:PATH="$pkgdir/usr" "$srcdir/$pkgname-$pkgver" |