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authorAlexander Minges2015-06-28 12:14:41 +0200
committerAlexander Minges2015-06-28 12:14:41 +0200
commita86ed619d57aeffb26f8995e23ddd45aa1163f5d (patch)
treedbcf175cd4ff88776e18501cf7406978f9af89d2
downloadaur-a86ed619d57aeffb26f8995e23ddd45aa1163f5d.tar.gz
Initial import
-rw-r--r--.SRCINFO20
-rw-r--r--PKGBUILD40
-rw-r--r--ssm-configure.ac.patch30
-rw-r--r--ssm.pc.in12
4 files changed, 102 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 00000000000..7c2f433bb56
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,20 @@
+pkgbase = libssm
+ pkgdesc = A C++ toolkit for superposition of macromolecules
+ pkgver = 1.4
+ pkgrel = 1
+ url = https://launchpad.net/ssm
+ arch = i686
+ arch = x86_64
+ license = LGPL
+ depends = mmdb2
+ depends = libccp4
+ replaces = ssmlib
+ source = ftp://ftp.ccp4.ac.uk/opensource/ssm-1.4.tar.gz
+ source = ssm-configure.ac.patch
+ source = ssm.pc.in
+ sha256sums = ea1a57d019bd69ab04e1b7c4faa2f8451584474a6fc16285c2211ef9f53b2704
+ sha256sums = 271ec9165b4f5dd5e8ccc622056de2dee0582c8efa42ce8652d560b67d7fa8b4
+ sha256sums = fd8c44c92c60768744840959c0caa6ccf53018a54f3b31263b5afe672e1d4a30
+
+pkgname = libssm
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 00000000000..1f61803f310
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,40 @@
+# Maintainer: Alexander Minges <alexander.minges@gmail.com>
+pkgname=libssm
+_pkgname=ssm
+pkgver=1.4
+pkgrel=1
+pkgdesc="A C++ toolkit for superposition of macromolecules"
+arch=('i686' 'x86_64')
+url="https://launchpad.net/ssm"
+license=('LGPL')
+depends=('mmdb2' 'libccp4')
+replaces=('ssmlib')
+source=(ftp://ftp.ccp4.ac.uk/opensource/$_pkgname-$pkgver.tar.gz
+ ssm-configure.ac.patch
+ ssm.pc.in)
+sha256sums=('ea1a57d019bd69ab04e1b7c4faa2f8451584474a6fc16285c2211ef9f53b2704'
+ '271ec9165b4f5dd5e8ccc622056de2dee0582c8efa42ce8652d560b67d7fa8b4'
+ 'fd8c44c92c60768744840959c0caa6ccf53018a54f3b31263b5afe672e1d4a30')
+
+build() {
+ cd "$srcdir/$_pkgname-$pkgver"
+ patch -Np0 -i "$srcdir/ssm-configure.ac.patch"
+
+ cp $srcdir/ssm.pc.in ./ssm.pc.in
+ aclocal
+ libtoolize --automake --copy
+ autoconf
+ automake --copy --add-missing --gnu
+ ./configure --prefix=/usr \
+ --with-mmdb=/usr \
+ --enable-ccp4 \
+ --enable-shared \
+ --disable-static
+ make
+}
+
+package() {
+ cd "$srcdir/$_pkgname-$pkgver"
+
+ make DESTDIR="$pkgdir/" install
+}
diff --git a/ssm-configure.ac.patch b/ssm-configure.ac.patch
new file mode 100644
index 00000000000..9d4bbc61f62
--- /dev/null
+++ b/ssm-configure.ac.patch
@@ -0,0 +1,30 @@
+--- configure.ac 2014-09-12 11:56:38.000000000 +0200
++++ configure.ac.new 2014-09-26 12:30:06.449528612 +0200
+@@ -21,17 +21,19 @@
+ AC_SEARCH_LIBS([cos], [m], [], [AC_MSG_ERROR([need math library])])
+
+ AC_LANG_PUSH([C++])
+-AC_CHECK_LIB(mmdb2, MMDB_CCIF_Init, :,
+- AC_MSG_ERROR([mmdb2 library not found.]))
+-AC_CHECK_HEADER(mmdb2/mmdb_manager.h, :,
+- AC_MSG_ERROR([mmdb2 headers not found.]))
++# AC_CHECK_LIB(mmdb2, MMDB_CCIF_Init, :,
++# AC_MSG_ERROR([mmdb2 library not found.]))
++# AC_CHECK_HEADER(mmdb2/mmdb_manager.h, :,
++# AC_MSG_ERROR([mmdb2 headers not found.]))
++PKG_CHECK_MODULES(MMDB, mmdb2)
+ AC_LANG_POP([C++])
+
+ if test "x$enable_superpose" != xno && test "x$enable_ccp4" = xyes; then
+- AC_CHECK_LIB(ccp4c, ccp4_banner, :,
+- AC_MSG_ERROR([ccp4c library not found.]))
+- AC_CHECK_HEADER(ccp4/ccp4_general.h, :,
+- AC_MSG_ERROR([libccp4 headers not found.]))
++# AC_CHECK_LIB(ccp4c, ccp4_banner, :,
++# AC_MSG_ERROR([ccp4c library not found.]))
++# AC_CHECK_HEADER(ccp4/ccp4_general.h, :,
++# AC_MSG_ERROR([libccp4 headers not found.]))
++ PKG_CHECK_MODULES(CCP4, libccp4c > 6.4)
+ fi
+
+ AM_CONDITIONAL([BUILD_SUPERPOSE], [test "x$enable_ccp4" != xno])
diff --git a/ssm.pc.in b/ssm.pc.in
new file mode 100644
index 00000000000..516c6078ba9
--- /dev/null
+++ b/ssm.pc.in
@@ -0,0 +1,12 @@
+prefix=@prefix@
+exec_prefix=@exec_prefix@
+libdir=@libdir@
+includedir=@includedir@/ssm
+
+Name: ssm
+Description: Macromolecular superposition library
+Version: @VERSION@
+Requires: mmdb2
+Conflicts:
+Libs: -L${libdir} -lssm
+Cflags: -I${includedir}