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authorBioArchLinuxBot2023-05-16 16:36:49 +0000
committerBioArchLinuxBot2023-05-16 16:36:49 +0000
commit0cbdc68018606bd29e5cf3b0ef41b2744d41995b (patch)
treee2ea8ccec4f10205c2032f3434f6ee8d689ef42d
parentc87d62d8d5f4a4333ff107c3b0b2af9c0543d1f8 (diff)
downloadaur-0cbdc68018606bd29e5cf3b0ef41b2744d41995b.tar.gz
[lilac] updated to 7.520-1
-rw-r--r--.SRCINFO6
-rw-r--r--PKGBUILD15
2 files changed, 10 insertions, 11 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 1847eaae0428..37c8b5793557 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,12 +1,12 @@
pkgbase = mafft
pkgdesc = Multiple alignment program for amino acid or nucleotide sequences. https://doi.org/10.1093/molbev/mst010
- pkgver = 7.505
+ pkgver = 7.520
pkgrel = 1
url = https://mafft.cbrc.jp/alignment/software
arch = x86_64
license = BSD
depends = perl
- source = mafft-7.505.tgz::https://mafft.cbrc.jp/alignment/software/mafft-7.505-with-extensions-src.tgz
- sha1sums = 30074dd1631c94f5a379afee0e1fec26d4d1a310
+ source = mafft-7.520.tgz::https://gitlab.com/sysimm/mafft/-/archive/v7.520/mafft-v7.520.tar.gz
+ sha1sums = 5cf29b694d1bea803b3bb671ea38f9c24e4c216c
pkgname = mafft
diff --git a/PKGBUILD b/PKGBUILD
index 29a4dcd64935..e73a2adcc4d5 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,7 +3,7 @@
# Contributor: Mick Elliot <micke at sfu dot ca>
pkgname=mafft
-pkgver=7.505
+pkgver=7.520
pkgrel=1
pkgdesc='Multiple alignment program for amino acid or nucleotide sequences. https://doi.org/10.1093/molbev/mst010'
arch=('x86_64')
@@ -12,17 +12,16 @@ license=('BSD')
depends=(
perl
)
-source=("${pkgname}-${pkgver}.tgz::https://mafft.cbrc.jp/alignment/software/${pkgname}-${pkgver}-with-extensions-src.tgz")
-sha1sums=('30074dd1631c94f5a379afee0e1fec26d4d1a310')
+source=("${pkgname}-${pkgver}.tgz::https://gitlab.com/sysimm/mafft/-/archive/v${pkgver}/mafft-v${pkgver}.tar.gz")
+sha1sums=('5cf29b694d1bea803b3bb671ea38f9c24e4c216c')
build() {
- make -C "${pkgname}-${pkgver}-with-extensions/core" PREFIX=/usr LIBDIR=/usr/lib/mafft
- make -C "${pkgname}-${pkgver}-with-extensions/extensions" PREFIX=/usr LIBDIR=/usr/lib/mafft
+ make -C "${pkgname}-v${pkgver}/core" PREFIX=/usr LIBDIR=/usr/lib/mafft
+ make -C "${pkgname}-v${pkgver}/extensions" PREFIX=/usr LIBDIR=/usr/lib/mafft
}
package() {
- make DESTDIR="${pkgdir}" -C "${pkgname}-${pkgver}-with-extensions/core" install PREFIX=/usr LIBDIR=/usr/lib/mafft
- make DESTDIR="${pkgdir}" -C "${pkgname}-${pkgver}-with-extensions/extensions" install PREFIX=/usr LIBDIR=/usr/lib/mafft
- install -Dm644 "${srcdir}/${pkgname}-${pkgver}-with-extensions/license" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
+ make DESTDIR="${pkgdir}" -C "${pkgname}-v${pkgver}/core" install PREFIX=/usr LIBDIR=/usr/lib/mafft
+ make DESTDIR="${pkgdir}" -C "${pkgname}-v${pkgver}/extensions" install PREFIX=/usr LIBDIR=/usr/lib/mafft
rm -vf "${pkgdir}/usr/lib/mafft/mafft-homologs.1" "${pkgdir}/usr/lib/mafft/mafft.1"
}