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| author | Martino Pilia | 2018-01-26 16:00:08 +0100 |
|---|---|---|
| committer | Martino Pilia | 2018-01-26 16:00:08 +0100 |
| commit | 3f9b00b79a0f4f4cc611eff8996099e169a71198 (patch) | |
| tree | 549c8b63750d757219a705ad31afb8fd057a248d | |
| parent | 3d8394aef0dac72088f965e89c346d07594defa1 (diff) | |
| download | aur-3f9b00b79a0f4f4cc611eff8996099e169a71198.tar.gz | |
version 1.9.16
| -rw-r--r-- | .SRCINFO | 6 | ||||
| -rw-r--r-- | PKGBUILD | 39 |
2 files changed, 39 insertions, 6 deletions
@@ -1,7 +1,7 @@ pkgbase = minc-toolkit-v2 pkgdesc = Medical Imaging NetCDF Toolkit - pkgver = 1.9.15 - pkgrel = 2 + pkgver = 1.9.16 + pkgrel = 1 url = https://www.mcgill.ca/bic/software/minc arch = any license = GPL3 @@ -24,6 +24,8 @@ pkgbase = minc-toolkit-v2 depends = nifticlib depends = insight-toolkit depends = elastix + depends = lapacke + depends = blas provides = minc-toolkit source = git+https://github.com/BIC-MNI/minc-toolkit-v2.git source = FindNIFTI.patch @@ -1,12 +1,12 @@ # Maintainer of this PKBGUILD file: Martino Pilia <martino.pilia@gmail.com> pkgname=minc-toolkit-v2 -pkgver=1.9.15 -pkgrel=2 +pkgver=1.9.16 +pkgrel=1 pkgdesc="Medical Imaging NetCDF Toolkit" arch=('any') url="https://www.mcgill.ca/bic/software/minc" license=('GPL3') -depends=('perl' 'libjpeg-turbo' 'libxi' 'libxmu' 'libgl' 'glu' 'fftw' 'glut' 'netcdf' 'pcre' 'zlib' 'hdf5' 'nifticlib' 'insight-toolkit' 'elastix') +depends=('perl' 'libjpeg-turbo' 'libxi' 'libxmu' 'libgl' 'glu' 'fftw' 'glut' 'netcdf' 'pcre' 'zlib' 'hdf5' 'nifticlib' 'insight-toolkit' 'elastix' 'lapacke' 'blas') makedepends=('git' 'cmake' 'bc' 'libhdf5') provides=('minc-toolkit') source=('git+https://github.com/BIC-MNI/minc-toolkit-v2.git' @@ -14,7 +14,7 @@ source=('git+https://github.com/BIC-MNI/minc-toolkit-v2.git' sha512sums=('SKIP' '28e12be5c8c7e397a063fa570fd4819dc45daf845a608164b9e7aec6fb6fb99d58f4f494d648147613bb80393b88d40f63748ea9f6096d96a1df1e66d17bbed7') -_release_commit="29273c3f065c86496c6a1270355077b534e676a3" +_release_commit="f7952e966e2fdd6169098df8c8ae13968b3e4832" _itk=`ls /usr/lib/cmake | grep -m1 ITK` _install_prefix="/usr/share/minc" @@ -64,6 +64,37 @@ prepare() { '6iLINK_DIRECTORIES(${LIBMINC_LIBRARY_DIRS})' \ patch_morphology/legacy/CMakeLists.txt + # blas and liblapacke for patch_morphology + sed -i \ + '20ilapacke' \ + patch_morphology/src/CMakeLists.txt + sed -i \ + '51icblas' \ + patch_morphology/src/CMakeLists.txt + sed -i \ + '51ilapacke' \ + patch_morphology/src/CMakeLists.txt + sed -i \ + '76ilapacke' \ + patch_morphology/src/CMakeLists.txt + sed -i \ + '76icblas' \ + patch_morphology/src/CMakeLists.txt + + # blas and lapacke for spams_test in BEaST + sed -i \ + '166iblas' \ + BEaST/CMakeLists.txt + sed -i \ + '167ilapack' \ + BEaST/CMakeLists.txt + sed -i \ + '201iblas' \ + BEaST/CMakeLists.txt + sed -i \ + '201ilapack' \ + BEaST/CMakeLists.txt + # the compiler won't like this sed -i \ 's/enum {false=0, true=1};//' \ |