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authorAndrew O'Neill2022-01-24 23:19:45 -0500
committerAndrew O'Neill2022-01-24 23:19:45 -0500
commit0016422eace41dfe30040960809aed34e7a67704 (patch)
tree6c26b79020c0e7cd258f47a1fedc3aec0a6a2ee2
parent197d8b96ce0d8c6ebbb3725f18d477b0f9cdb80a (diff)
downloadaur-0016422eace41dfe30040960809aed34e7a67704.tar.gz
Version bump
-rw-r--r--.SRCINFO6
-rw-r--r--PKGBUILD13
2 files changed, 10 insertions, 9 deletions
diff --git a/.SRCINFO b/.SRCINFO
index daf51f83034..71dead58b5c 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = mothur
pkgdesc = A bioinformatics program for analyzing microbial communities.
- pkgver = 1.46.1
+ pkgver = 1.47.0
pkgrel = 1
url = https://www.mothur.org/
arch = x86_64
@@ -8,7 +8,7 @@ pkgbase = mothur
makedepends = boost
makedepends = hdf5
depends = boost-libs
- source = mothur-1.46.1.tar.gz::https://github.com/mothur/mothur/archive/v1.46.1.tar.gz
- sha256sums = 29b500b3c92d726cde34922f697f2e47f0b7127d76d9a6fb167cc2b8ba3d00fd
+ source = mothur-1.47.0.tar.gz::https://github.com/mothur/mothur/archive/v.1.47.0.tar.gz
+ sha256sums = b33a1d56476c729fe0f7070345712caaee6b3aa2e603953eec052e945b6f2eab
pkgname = mothur
diff --git a/PKGBUILD b/PKGBUILD
index 4ba1f150b33..86aa795c7dc 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
# Contributor: Christian Krause ("wookietreiber") <christian.krause@mailbox.org>
pkgname=mothur
-pkgver=1.46.1
+pkgver=1.47.0
pkgrel=1
pkgdesc='A bioinformatics program for analyzing microbial communities.'
arch=('x86_64')
@@ -10,27 +10,28 @@ url='https://www.mothur.org/'
license=('GPL3')
depends=('boost-libs')
makedepends=('boost' 'hdf5')
-source=("${pkgname}-${pkgver}.tar.gz::https://github.com/${pkgname}/${pkgname}/archive/v${pkgver}.tar.gz")
-sha256sums=('29b500b3c92d726cde34922f697f2e47f0b7127d76d9a6fb167cc2b8ba3d00fd')
+source=("${pkgname}-${pkgver}.tar.gz::https://github.com/${pkgname}/${pkgname}/archive/v.${pkgver}.tar.gz")
+sha256sums=('b33a1d56476c729fe0f7070345712caaee6b3aa2e603953eec052e945b6f2eab')
prepare() {
- cd "${pkgname}-${pkgver}"
+ cd "${pkgname}-v.${pkgver}"
# I hate this so much.
sed -i '87d' source/mothur.h
sed -i '13 i \#include <memory>' source/writer.h
+ sed -i '17 i \#include "unistd.h"' source/utils.cpp
sed -i 's/skipUchime),/skipUchime), source\/,/g' Makefile
sed -i 's/CXXFLAGS = -O3/CXXFLAGS = -O3 -std=c++11/' source/uchime_src/makefile
}
build() {
- cd "${pkgname}-${pkgver}"
+ cd "${pkgname}-v.${pkgver}"
make
}
package() {
- cd "${pkgname}-${pkgver}"
+ cd "${pkgname}-v.${pkgver}"
install -Dm755 mothur "${pkgdir}/usr/bin/mothur"
install -Dm755 uchime "${pkgdir}/usr/bin/uchime"