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authorChristian Krause2017-03-31 13:12:07 +0200
committerChristian Krause2017-03-31 13:12:07 +0200
commit11fc917b57f3d735c914eef7d8953ce0e24a2561 (patch)
tree281c3809bc3d162d0269a0ab11528cf918fe99bb
downloadaur-11fc917b57f3d735c914eef7d8953ce0e24a2561.tar.gz
mothur-1.39.5-1
-rw-r--r--.SRCINFO17
-rw-r--r--.gitignore1
-rw-r--r--PKGBUILD36
3 files changed, 54 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 00000000000..f8ccf6ad2d0
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,17 @@
+# Generated by mksrcinfo v8
+# Fri Mar 31 11:08:08 UTC 2017
+pkgbase = mothur
+ pkgdesc = computational microbial ecology
+ pkgver = 1.39.5
+ pkgrel = 1
+ url = https://www.mothur.org/
+ arch = i686
+ arch = x86_64
+ license = GPL3
+ makedepends = boost
+ depends = boost-libs
+ source = mothur-1.39.5.tar.gz::https://github.com/mothur/mothur/archive/v1.39.5.tar.gz
+ md5sums = 1f826ea4420e6822fc0db002c5940b92
+
+pkgname = mothur
+
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 00000000000..42ab3cf03f2
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+*.pkg.tar*
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 00000000000..f9ffb1adbb5
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,36 @@
+# Maintainer: Christian Krause ("wookietreiber") <christian.krause@mailbox.org>
+
+pkgname=mothur
+pkgver=1.39.5
+pkgrel=1
+pkgdesc="computational microbial ecology"
+arch=('i686' 'x86_64')
+url="https://www.mothur.org/"
+license=('GPL3')
+depends=('boost-libs')
+makedepends=('boost')
+
+source=("$pkgname-$pkgver.tar.gz::https://github.com/mothur/mothur/archive/v$pkgver.tar.gz")
+
+prepare() {
+ cd $srcdir/$pkgname-$pkgver
+
+ sed -e 's|BOOST_LIBRARY_DIR="\\"Enter_your_boost_library_path_here\\""|BOOST_LIBRARY_DIR = /usr/lib|' \
+ -e 's|BOOST_INCLUDE_DIR="\\"Enter_your_boost_include_path_here\\""|BOOST_INCLUDE_DIR = /usr/include|' \
+ -i Makefile
+}
+
+build() {
+ cd $srcdir/$pkgname-$pkgver
+
+ make
+}
+
+package() {
+ cd $srcdir/$pkgname-$pkgver
+
+ install -Dm755 mothur $pkgdir/usr/bin/mothur
+ install -Dm755 uchime $pkgdir/usr/bin/uchime
+}
+
+md5sums=('1f826ea4420e6822fc0db002c5940b92')