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authorAndrew O'Neill2020-05-16 13:27:46 -0400
committerAndrew O'Neill2020-05-16 13:27:46 -0400
commitb7b66c9d8b4903f015784ef43b141f8b251d620a (patch)
tree63e8e1243731686d6d5618a4475af9bfdd008e47
parentb5eb016d15876fb4cee989a309fa79c0dde1ed98 (diff)
downloadaur-b7b66c9d8b4903f015784ef43b141f8b251d620a.tar.gz
Version bump. uChime is excluded as it fails to build
-rw-r--r--.SRCINFO6
-rw-r--r--PKGBUILD13
2 files changed, 12 insertions, 7 deletions
diff --git a/.SRCINFO b/.SRCINFO
index d270ba4e976..fad8dc18f17 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = mothur
pkgdesc = A bioinformatics program for analyzing microbial communities.
- pkgver = 1.43.0
+ pkgver = 1.44.1
pkgrel = 1
url = https://www.mothur.org/
arch = x86_64
@@ -9,8 +9,8 @@ pkgbase = mothur
makedepends = hdf5
depends = boost-libs
options = !buildflags
- source = https://github.com/mothur/mothur/archive/v.1.43.0.tar.gz
- sha256sums = e2b90a9d0ddcc521a9252f9a5d82d1613688de42bbec74bfa4c94dc6d2525530
+ source = mothur-1.44.1.tar.gz::https://github.com/mothur/mothur/archive/v.1.44.1.tar.gz
+ sha256sums = 0fd6e7a1affdadb782639db58b4d43b9194b78a1ddfb54f8901fbca215922bb5
pkgname = mothur
diff --git a/PKGBUILD b/PKGBUILD
index b2c3fa4a4e8..d724402d0b0 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
# Contributor: Christian Krause ("wookietreiber") <christian.krause@mailbox.org>
pkgname=mothur
-pkgver=1.43.0
+pkgver=1.44.1
pkgrel=1
pkgdesc='A bioinformatics program for analyzing microbial communities.'
arch=('x86_64')
@@ -11,8 +11,14 @@ license=('GPL3')
depends=('boost-libs')
makedepends=('boost' 'hdf5')
options=('!buildflags')
-source=("https://github.com/${pkgname}/${pkgname}/archive/v.${pkgver}.tar.gz")
-sha256sums=('e2b90a9d0ddcc521a9252f9a5d82d1613688de42bbec74bfa4c94dc6d2525530')
+source=("${pkgname}-${pkgver}.tar.gz::https://github.com/${pkgname}/${pkgname}/archive/v.${pkgver}.tar.gz")
+sha256sums=('0fd6e7a1affdadb782639db58b4d43b9194b78a1ddfb54f8901fbca215922bb5')
+
+prepare() {
+ cd "${pkgname}-v.${pkgver}"
+
+ sed -i 's/skipUchime),/skipUchime), source\/,/' Makefile
+}
build() {
cd "${pkgname}-v.${pkgver}"
@@ -24,5 +30,4 @@ package() {
cd "${pkgname}-v.${pkgver}"
install -Dm755 mothur "${pkgdir}/usr/bin/mothur"
- install -Dm755 uchime "${pkgdir}/usr/bin/uchime"
}