diff options
| author | Lev Levitsky | 2015-06-14 15:38:57 +0300 |
|---|---|---|
| committer | Lev Levitsky | 2015-06-14 15:38:57 +0300 |
| commit | 53f7998342f1b4eae80dc93221e266bc70959475 (patch) | |
| tree | e7b36cbd224b9bb7932b403be24214be61ec5f1e | |
| download | aur-53f7998342f1b4eae80dc93221e266bc70959475.tar.gz | |
Initial import
| -rw-r--r-- | .SRCINFO | 20 | ||||
| -rw-r--r-- | PKGBUILD | 30 | ||||
| -rwxr-xr-x | msamanda | 2 |
3 files changed, 52 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..73431fe2c0ba --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,20 @@ +# Generated by makepkg 4.2.1 +# Fri May 1 20:16:37 UTC 2015 +pkgbase = msamanda + pkgdesc = A scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins + pkgver = 1.0.0.4485 + pkgrel = 1 + url = http://ms.imp.ac.at/?goto=msamanda + arch = any + license = custom + depends = mono + noextract = MSAmanda_Standalone_LinuxMac_1.0.0.4485.tar.gz + source = http://ms.imp.ac.at/inc/pd-nodes/msamanda/MSAmanda_Standalone_LinuxMac_1.0.0.4485.tar.gz + source = LICENSE::http://ms.imp.ac.at/inc/pd-nodes/msamanda/LicenseAgreement_MSAmanda.rtf + source = msamanda + md5sums = 2144b367817474a553abf12cfe2e4c8d + md5sums = 7f0bf2c30c4d78b18a0138df20050abf + md5sums = a870877935f5aed33fd0a7ec73e5abca + +pkgname = msamanda + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..7689e267021b --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,30 @@ +# Maintainer: Lev Levitsky <levlev@mail.ru> +pkgname=msamanda +pkgver=1.0.0.4485 +pkgrel=1 +pkgdesc="A scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins" +arch=('any') +url="http://ms.imp.ac.at/?goto=msamanda" +license=('custom') +depends=('mono') +options=() +source=("http://ms.imp.ac.at/inc/pd-nodes/msamanda/MSAmanda_Standalone_LinuxMac_$pkgver.tar.gz" + "LICENSE::http://ms.imp.ac.at/inc/pd-nodes/msamanda/LicenseAgreement_MSAmanda.rtf" + "msamanda") +noextract=("MSAmanda_Standalone_LinuxMac_$pkgver.tar.gz") +md5sums=('2144b367817474a553abf12cfe2e4c8d' + '7f0bf2c30c4d78b18a0138df20050abf' + 'a870877935f5aed33fd0a7ec73e5abca') + +prepare() { + mkdir "MSAmanda" + bsdtar -xf "MSAmanda_Standalone_LinuxMac_$pkgver.tar.gz" -C MSAmanda + chmod -R o+rx MSAmanda +} + +package() { + mkdir "$pkgdir/opt" + cp -rt "$pkgdir/opt/" "$srcdir/MSAmanda" + install -D "$srcdir/msamanda" "$pkgdir/usr/bin/msamanda" + install -D "$srcdir/LICENSE" "$pkgdir/usr/share/licenses/$pkgname/LICENSE" +} diff --git a/msamanda b/msamanda new file mode 100755 index 000000000000..eb32c2f78492 --- /dev/null +++ b/msamanda @@ -0,0 +1,2 @@ +#!/usr/bin/sh +mono /opt/MSAmanda/MSAmanda.exe "$@" |