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authorLev Levitsky2017-04-13 16:11:02 +0300
committerLev Levitsky2017-04-13 16:11:02 +0300
commit48ca38c979416f7d9edea0f4cf1f9d167f3b9030 (patch)
tree2fc27406c610acc0d314d50d08ec6e1effaed84f
parent5eef9be8f35653f084c77ee06fcd3c61bbd5c170 (diff)
downloadaur-48ca38c979416f7d9edea0f4cf1f9d167f3b9030.tar.gz
Switch to github, 2017.01.27 release
-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD20
2 files changed, 16 insertions, 14 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 6d0a1b2db283..880505d1cc34 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,15 +1,17 @@
+# Generated by mksrcinfo v8
+# Thu Apr 13 13:10:18 UTC 2017
pkgbase = msgfplus
pkgdesc = MS/MS database search tool
- pkgver = 9979
+ pkgver = 2017.01.27
pkgrel = 1
- url = https://bix-lab.ucsd.edu/pages/viewpage.action?pageId=13533355
+ url = https://github.com/sangtaekim/msgfplus
arch = any
license = custom
depends = java-runtime
- source = http://proteomics.ucsd.edu/Software/MSGFPlus/MSGFPlus.zip
+ source = https://github.com/sangtaekim/msgfplus/releases/download/v2017.01.27/v20170127.zip
source = msgf+
source = mzid2tsv
- md5sums = 938cca2139fdbb3e678f0c4e5971950d
+ md5sums = d565e38b34d8be73fca557fd113be716
md5sums = c43c6581b373266171c3930c3718eb9c
md5sums = c860b9c30b74dae43de2d3933a405ac1
diff --git a/PKGBUILD b/PKGBUILD
index 40c62f4eb2f2..8ca1f4776447 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,24 +1,24 @@
# Maintainer: Lev Levitsky <levlev@mail.ru>
pkgname=msgfplus
-pkgver=9979
+pkgver=2017.01.27
pkgrel=1
pkgdesc="MS/MS database search tool"
arch=('any')
-url="https://bix-lab.ucsd.edu/pages/viewpage.action?pageId=13533355"
+url="https://github.com/sangtaekim/msgfplus"
license=('custom')
depends=('java-runtime')
-source=("http://proteomics.ucsd.edu/Software/MSGFPlus/MSGFPlus.zip"
+source=("https://github.com/sangtaekim/msgfplus/releases/download/v${pkgver}/v${pkgver//\./}.zip"
"msgf+"
"mzid2tsv")
-md5sums=('938cca2139fdbb3e678f0c4e5971950d'
+md5sums=('d565e38b34d8be73fca557fd113be716'
'c43c6581b373266171c3930c3718eb9c'
'c860b9c30b74dae43de2d3933a405ac1')
package() {
- cd "$srcdir"
- install -D MSGFPlus.jar "${pkgdir}/usr/share/java/${pkgname}/MSGFPlus.jar"
- install -D LICENSE.txt "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE.txt"
- install -D Mods.txt "${pkgdir}/usr/share/${pkgname}/Mods.txt"
- install -D msgf+ "${pkgdir}/usr/bin/msgf+"
- install -D mzid2tsv "${pkgdir}/usr/bin/mzid2tsv"
+cd "$srcdir"
+ install -D MSGFPlus.jar "${pkgdir}/usr/share/java/${pkgname}/MSGFPlus.jar"
+ mkdir -p "${pkgdir}/usr/share/${pkgname}"
+ cp -r doc/examples "${pkgdir}/usr/share/${pkgname}/"
+ install -D msgf+ "${pkgdir}/usr/bin/msgf+"
+ install -D mzid2tsv "${pkgdir}/usr/bin/mzid2tsv"
}