Use maven build

2 files changed, 15 insertions, 8 deletions

diff --git a/.SRCINFO b/.SRCINFO
index 347034b34785..7367c547d932 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,17 +1,18 @@
 pkgbase = msgfplus
 	pkgdesc = MS/MS database search tool
 	pkgver = 2020.06.16
-	pkgrel = 1
+	pkgrel = 2
 	url = https://github.com/MSGFPlus/msgfplus
 	arch = any
 	license = custom
+	makedepends = maven
 	depends = java-environment
-	source = https://github.com/MSGFPlus/msgfplus/releases/download/v2020.06.16/MSGFPlus_v20200616.zip
+	source = https://github.com/MSGFPlus/msgfplus/archive/v2020.06.16.zip
 	source = msgf+
 	source = mzid2tsv
 	source = scoringParamGen
 	source = https://raw.githubusercontent.com/sangtaekim/msgfplus/master/LICENSE.txt
-	md5sums = 6c67550069a466c03244adb855bcc225
+	md5sums = 37eae92f385e2f4ec7c4a2182f25c56e
 	md5sums = c43c6581b373266171c3930c3718eb9c
 	md5sums = c860b9c30b74dae43de2d3933a405ac1
 	md5sums = 315d84069d6333a83599aa93b782eb5c
diff --git a/PKGBUILD b/PKGBUILD
index 7fde561cfa75..6b9b2bff0bbf 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,28 +1,34 @@
 # Maintainer: Lev Levitsky <levlev@mail.ru>
 pkgname=msgfplus
 pkgver=2020.06.16
-pkgrel=1
+pkgrel=2
 pkgdesc="MS/MS database search tool"
 arch=('any')
 url="https://github.com/MSGFPlus/msgfplus"
 license=('custom')
 depends=('java-environment')
-source=("https://github.com/MSGFPlus/msgfplus/releases/download/v${pkgver}/MSGFPlus_v${pkgver//./}.zip"
+makedepends=('maven')
+source=("https://github.com/MSGFPlus/msgfplus/archive/v${pkgver}.zip"
 		"msgf+"
 		"mzid2tsv"
         "scoringParamGen"
         "https://raw.githubusercontent.com/sangtaekim/msgfplus/master/LICENSE.txt")
-md5sums=('6c67550069a466c03244adb855bcc225'
+md5sums=('37eae92f385e2f4ec7c4a2182f25c56e'
          'c43c6581b373266171c3930c3718eb9c'
          'c860b9c30b74dae43de2d3933a405ac1'
          '315d84069d6333a83599aa93b782eb5c'
          '88b22e0922010401ea88bcf03e3bb5d2')
 
+build() {
+    cd "${srcdir}/${pkgname}-${pkgver}"
+    mvn package
+}
+
 package() {
     cd "$srcdir"
-    install -D MSGFPlus.jar "${pkgdir}/usr/share/java/${pkgname}/MSGFPlus.jar"
+    install -D "${pkgname}-${pkgver}/target/MSGFPlus.jar" "${pkgdir}/usr/share/java/${pkgname}/MSGFPlus.jar"
     mkdir -p "${pkgdir}/usr/share/${pkgname}"
-    cp -r Docs/Examples "${pkgdir}/usr/share/${pkgname}/"
+    cp -r "${pkgname}-${pkgver}/docs/examples" "${pkgdir}/usr/share/${pkgname}/"
     install -D msgf+ "${pkgdir}/usr/bin/msgf+"
     install -D mzid2tsv "${pkgdir}/usr/bin/mzid2tsv"
     install -D scoringParamGen "${pkgdir}/usr/bin/scoringParamGen"