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| author | George Amanakis | 2019-05-28 13:51:57 -0400 |
|---|---|---|
| committer | George Amanakis | 2019-05-28 13:51:57 -0400 |
| commit | 28dac66fddbeea95bcba1f9cf00a2f1fce29c43f (patch) | |
| tree | 36488b1da30dd83a40496e0502537560d7ddf0d5 | |
| parent | 3ba8823891d816f9d5388cee96d4b912765222c0 (diff) | |
| download | aur-28dac66fddbeea95bcba1f9cf00a2f1fce29c43f.tar.gz | |
Make ngs-python a separate package due to dependencies
Signed-off-by: George Amanakis <gamanakis@gmail.com>
| -rw-r--r-- | .SRCINFO | 2 | ||||
| -rw-r--r-- | PKGBUILD | 16 |
2 files changed, 10 insertions, 8 deletions
@@ -1,7 +1,7 @@ pkgbase = ngs pkgdesc = A new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. pkgver = 2.9.6 - pkgrel = 1 + pkgrel = 2 url = https://github.com/ncbi/ngs arch = x86_64 license = custom:PublicDomain @@ -4,7 +4,7 @@ pkgname=ngs pkgver=2.9.6 -pkgrel=1 +pkgrel=2 pkgdesc="A new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing." arch=('x86_64') url="https://github.com/ncbi/ngs" @@ -25,20 +25,22 @@ prepare(){ build(){ cd "${pkgname}-${pkgver}" ./configure --prefix="$pkgdir/usr/" --build-prefix="$srcdir/build" - make + make -C ngs-sdk + make -C ngs-java } -check(){ - cd "${pkgname}-${pkgver}" - make -k test -} +#check(){ +# cd "${pkgname}-${pkgver}" +# make -k test +#} package(){ cd "$pkgname-$pkgver" # ncbi does not use autoconf/automake so there is no respect for DESTDIR # but there is a ROOT(dir) #make "ROOT=$pkgdir" install - make install + make -C ngs-sdk install + make -C ngs-java install # add license mkdir -p "$pkgdir/usr/share/licenses/${pkgname}" |