Add openmalaria package.

3 files changed, 70 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..a1e8895fd4fb
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,23 @@
+pkgbase = openmalaria
+	pkgdesc = A simulator of malaria epidemiology and control.
+	pkgver = 36.0
+	pkgrel = 1
+	url = https://github.com/SwissTPH/openmalaria
+	arch = x86_64
+	arch = i686
+	license = GPL2
+	makedepends = boost
+	makedepends = cmake
+	makedepends = python2
+	makedepends = xsd
+	makedepends = zlib
+	depends = gcc-libs-multilib
+	depends = gsl
+	depends = xerces-c
+	source = https://github.com/SwissTPH/openmalaria/archive/schema-36.0.tar.gz
+	source = openmalaria.sh
+	sha256sums = 9b5b6c8383b02b36a9f08d43e79da633518000c485b3505d370f6fe7c0b34152
+	sha256sums = 3b4e42e0d5663485737a4d658df62e7e4901b059ca3bd19f4883158e49a2652c
+
+pkgname = openmalaria
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..878a36118323
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,39 @@
+# Maintainer: sgtbigman <sgtbigman at gmail dot com>
+pkgname=openmalaria
+pkgver=36.0
+pkgrel=1
+pkgdesc="A simulator of malaria epidemiology and control."
+arch=('x86_64' 'i686')
+url="https://github.com/SwissTPH/openmalaria"
+license=('GPL2')
+depends=('gcc-libs-multilib' 'gsl' 'xerces-c')
+makedepends=('boost' 'cmake' 'python2' 'xsd' 'zlib')
+source=("https://github.com/SwissTPH/openmalaria/archive/schema-${pkgver}.tar.gz"
+        "$pkgname.sh")
+sha256sums=('9b5b6c8383b02b36a9f08d43e79da633518000c485b3505d370f6fe7c0b34152'
+            '3b4e42e0d5663485737a4d658df62e7e4901b059ca3bd19f4883158e49a2652c')
+
+build() {
+  cd "$pkgname-schema-$pkgver"
+
+  mkdir -p build && cd build
+  cmake -DCMAKE_BUILD_TYPE=Release -D PYTHON_EXECUTABLE=/usr/bin/python2 ..
+  make
+}
+
+check() {
+  cd "$pkgname-schema-$pkgver/build"
+
+  make test
+}
+
+package() {
+  mkdir -p "$pkgdir/usr/bin"
+  mkdir -p "$pkgdir/usr/share/$pkgname"
+  cd "$pkgname-schema-$pkgver"
+  install -Dm755 "$srcdir/$pkgname.sh" "$pkgdir/usr/bin/$pkgname"
+  install -Dm755 build/openMalaria "$pkgdir/usr/bin/"
+  install -Dm644 build/schema/scenario_current.xsd "$pkgdir/usr/share/$pkgname/"
+  install -Dm644 test/densities.csv "$pkgdir/usr/share/$pkgname/"
+  install -Dm644 test/autoRegressionParameters.csv "$pkgdir/usr/share/$pkgname/"
+}
diff --git a/openmalaria.sh b/openmalaria.sh
new file mode 100644
index 000000000000..1eb0165fec59
--- /dev/null
+++ b/openmalaria.sh
@@ -0,0 +1,8 @@
+#!/bin/sh
+ln -s /usr/share/openmalaria/scenario_current.xsd "$(pwd)/scenario_current.xsd"
+ln -s /usr/share/openmalaria/densities.csv "$(pwd)/densities.csv"
+ln -s /usr/share/openmalaria/autoRegressionParameters.csv "$(pwd)/autoRegressionParameters.csv"
+/usr/bin/openMalaria "$@"
+unlink scenario_current.xsd
+unlink densities.csv
+unlink autoRegressionParameters.csv