Updated to version 5.0.1p1

8 files changed, 95 insertions, 1672 deletions

diff --git a/.SRCINFO b/.SRCINFO
index 711c731eb6d6..ad630d1d8106 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,9 +1,9 @@
 # Generated by mksrcinfo v8
-# Fri May 13 20:48:40 UTC 2016
+# Tue Nov 22 21:21:25 UTC 2016
 pkgbase = paraview-salome
 	pkgdesc = Parallel Visualization Application using VTK - This version is built to be linked against salome modules
-	pkgver = 4.2.0
-	pkgrel = 3
+	pkgver = 5.0.1p1
+	pkgrel = 1
 	url = http://www.paraview.org
 	arch = i686
 	arch = x86_64
@@ -18,7 +18,7 @@ pkgbase = paraview-salome
 	depends = boost
 	depends = expat
 	depends = freetype2
-	depends = hdf5-1.8
+	depends = hdf5
 	depends = libjpeg
 	depends = libxml2
 	depends = libtheora
@@ -26,28 +26,20 @@ pkgbase = paraview-salome
 	depends = libtiff
 	depends = zlib
 	depends = protobuf
+	depends = openmpi
+	depends = gl2ps
 	optdepends = python2-matplotlib: Needed to support equation rendering using MathText markup language
 	optdepends = python2-numpy: Needed for using some filters such as "Python Calculator"
-	provides = paraview=4.2.0
+	provides = paraview=5.0.1
 	options = staticlibs
-	source = http://paraview.org/files/v4.2/ParaView-v4.2.0-source.tar.gz
+	source = http://files.salome-platform.org/Salome/Salome7.8.0/SALOME-7.8.0-OPENSOURCE-DB08.tgz
 	source = paraview-salome.png
 	source = paraview-salome.desktop
-	source = uint.patch
-	source = gcc49.patch
-	source = gcc6.patch
-	source = ffmpeg-3.patch
-	source = ParaView-4.2.0.patch
-	source = surface_lic.png
-	md5sums = 77cf0e3804eb7bb91d2d94b10bd470f4
+	source = ffmpeg3.patch
+	md5sums = 53c07c80009555d1ffc5e0bf13cfbf20
 	md5sums = db623002bc71a257ddfdd0c9c7b14c3f
 	md5sums = e3ba22be644f91da7018f429c3b7dd39
-	md5sums = e034fc590bd332175dcd6bf126f14d97
-	md5sums = 12fa547d0c79ea6a780279712574a5fe
-	md5sums = 951e035583c784986a3cd5e7e35519e2
-	md5sums = 58055ab1dd936cc233120b10f4e7eaa7
-	md5sums = 3e4c48633eb337c42653f51e6112f347
-	md5sums = 2f3f049a703224ca230eadffd5016455
+	md5sums = ec32574de308796bc8086a896eb8c2f9
 
 pkgname = paraview-salome
 
diff --git a/PKGBUILD b/PKGBUILD
index ef165e1c6d80..2093a7247cea 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -5,19 +5,22 @@
 # Contributor: Simon Zilliken <simon____AT____zilliken____DOT____name>
 
 pkgname=paraview-salome
-pkgver=4.2.0
-pkgrel=3
+pkgver=5.0.1p1
+_salomever=7.8.0
+pkgrel=1
 pkgdesc='Parallel Visualization Application using VTK - This version is built to be linked against salome modules'
 arch=('i686' 'x86_64')
 url='http://www.paraview.org'
 license=('custom')
-depends=('qtwebkit' 'python2' 'ffmpeg' 'boost' 'expat' 'freetype2' 'hdf5-1.8' 'libjpeg' 'libxml2' 'libtheora' 'libpng' 'libtiff' 'zlib' 'protobuf')
+depends=('qtwebkit' 'python2' 'ffmpeg' 'boost' 'expat' 'freetype2' 'hdf5' 'libjpeg' 'libxml2' 'libtheora' 'libpng' 'libtiff' 'zlib' 'protobuf' 'openmpi' 'gl2ps')
 makedepends=('cmake' 'mesa' 'eigen3' 'doxygen')
 optdepends=('python2-matplotlib: Needed to support equation rendering using MathText markup language' 'python2-numpy: Needed for using some filters such as "Python Calculator"')
-source=("http://paraview.org/files/v${pkgver:0:3}/ParaView-v${pkgver}-source.tar.gz" "${pkgname}.png" "${pkgname}.desktop" "uint.patch" "gcc49.patch" "gcc6.patch" "ffmpeg-3.patch" "ParaView-4.2.0.patch" "surface_lic.png" )
+source=("http://files.salome-platform.org/Salome/Salome${_salomever}/SALOME-${_salomever}-OPENSOURCE-DB08.tgz"
+	"${pkgname}.png" "${pkgname}.desktop"
+	"ffmpeg3.patch" )
 
 options=(staticlibs)
-provides=("paraview=${pkgver}")
+provides=("paraview=${pkgver:0:5}")
 
 # _installdir=/opt/${pkgname}
 _installdir=/usr
@@ -27,36 +30,18 @@ prepare(){
 
   if [ -d build ]; then
     rm -rf build
-  fi 
-
-  cd "${srcdir}/ParaView-v${pkgver}-source"
-  
-  # patch to solve gcc49 compatiblity
-  patch -Np1 -i "${srcdir}/gcc49.patch"
-
-  # patch for gcc6 compatibility
-  sed -i -e "s|345|3456|" {VTK/CMake/GenerateExportHeader.cmake,VTK/CMake/vtkCompilerExtras.cmake}
-  patch -Np1 -i "${srcdir}/gcc6.patch"
-  
-  # patch to solve uint conversion to int
-  patch -Np1 -i "${srcdir}/uint.patch"
-
-  # patch to copile with ffmpeg-3
-  patch -Np1 -i "${srcdir}/ffmpeg-3.patch"
-
-  # patch from salome-platform
-  patch -Np1 -i "${srcdir}/ParaView-4.2.0.patch"
+  fi
 
-  sed -i "s%RTLD_LAZY%RTLD_LAZY|RTLD_NODELETE%g" VTK/Utilities/KWSys/vtksys/DynamicLoader.cxx
+  bsdtar -xf "${srcdir}/SALOME-${_salomever}-OPENSOURCE-DB08/PREREQUISITES/SOURCES/ParaView-5.0.1p1.tar.gz"
 
-  cp -f ${srcdir}/surface_lic.png Plugins/SurfaceLIC/doc
+  cd "${srcdir}/ParaView-${pkgver}"
+  patch -Np1 -i ../ffmpeg3.patch
 }
 
 build() {
-  rm -rf "${srcdir}/build"
-  mkdir "${srcdir}/build"
+  mkdir -p "${srcdir}/build"
   cd "${srcdir}/build"
-  
+
   local cmake_options=""
 
   if test "$CARCH" == x86_64; then
@@ -65,137 +50,129 @@ build() {
   fi
 
   # cmake general settings
+  cmake_options+=" -DCMAKE_INSTALL_PREFIX:STRING=${_installdir}"
   cmake_options+=" -DCMAKE_BUILD_TYPE:STRING=Release"
-  # cmake_options+=" -DCMAKE_CXX_STANDARD=98"
-  cmake_options+=" -DCMAKE_INSTALL_PREFIX=${_installdir}"
-  cmake_options+=" -DBUILD_SHARED_LIBS=ON"
-  cmake_options+=" -DBUILD_TESTING=OFF"
-  cmake_options+=" -DBUILD_EXAMPLES=OFF"
-  cmake_options+=" -DBUILD_DOCUMENTATION=ON"
-  cmake_options+=" -DDOCUMENTATION_HTML_HELP=ON"
-  cmake_options+=" -DCMAKE_VERBOSE_MAKEFILE=OFF"
+  cmake_options+=" -DBUILD_SHARED_LIBS:BOOL=ON"
+  cmake_options+=" -DBUILD_TESTING:BOOL=OFF"
+  cmake_options+=" -DBUILD_EXAMPLES:BOOL=OFF"
+  cmake_options+=" -DBUILD_DOCUMENTATION:BOOL=OFF"
+  cmake_options+=" -DDOCUMENTATION_HTML_HELP:BOOL=ON"
+
+  # verbose mode
+  cmake_options+=" -DCMAKE_VERBOSE_MAKEFILE:BOOL=OFF"
+
+  # mpi
+  cmake_options+=" -DPARAVIEW_USE_MPI:BOOL=ON"
+  cmake_options+=" -DCMAKE_C_COMPILER:STRING=/usr/bin/mpicc"
+  cmake_options+=" -DCMAKE_CXX_COMPILER:STRING=/usr/bin/mpic++"
 
   # Paraview general settings
   cmake_options+=" -DPARAVIEW_INSTALL_DEVELOPMENT_FILES:BOOL=ON"
+  cmake_options+=" -DPARAVIEW_USE_VISITBRIDGE:BOOL=ON"
 
   # VTK general settings
   cmake_options+=" -DVTK_USE_64BIT_IDS:BOOL=OFF"
-
+  cmake_options+=" -DVTK_NO_PYTHON_THREADS:BOOL=OFF"
+  cmake_options+=" -DVTK_REPORT_OPENGL_ERRORS:BOOL=OFF"
+  cmake_options+=" -DVTK_PYTHON_FULL_THREADSAFE=ON"
+  
   # Qt settings
   cmake_options+=" -DPARAVIEW_BUILD_QT_GUI:BOOL=ON"
+  cmake_options+=" -DPARAVIEW_QT_VERSION=4"
+  cmake_options+=" -DVTK_QT_VERSION=4"
   cmake_options+=" -DQT_HELP_GENERATOR:STRING=/usr/bin/qhelpgenerator-qt4"
   cmake_options+=" -DQT_QMAKE_EXECUTABLE=/usr/bin/qmake-qt4"
 
   # Python settings
   cmake_options+=" -DPARAVIEW_ENABLE_PYTHON:BOOL=ON"
-  cmake_options+=" -DVTK_WRAP_PYTHON:BOOL=ON"
   cmake_options+=" -DPYTHON_EXECUTABLE:STRING=/usr/bin/python2"
   cmake_options+=" -DPYTHON_INCLUDE_DIR:STRING=/usr/include/python2.7"
   cmake_options+=" -DPYTHON_LIBRARY:STRING=/usr/lib/python2.7/config/libpython2.7.so"
-  cmake_options+=" -DVTK_NO_PYTHON_THREADS:BOOL=OFF"
 
   # Tcl/Tk settings
   # TEMPORARILY DISABLE TCL WRAPPINGS DUE TO BUG IN PARAVIEW WRAPPER UTILITY!
-  if false ; then
-    local tcl_version = "8.6"
-    cmake_options+=" -DVTK_WRAP_TCL:BOOL=ON"
-    cmake_options+=" -DTCL_INCLUDE_PATH:STRING=/usr/include"
-    cmake_options+=" -DTCL_LIBRARY:STRING=/usr/lib/libtcl${tcl_version}.so"
-    cmake_options+=" -DTCL_TCLSH:STRING=/usr/bin/tclsh${tcl_version}"
-    cmake_options+=" -DTK_INCLUDE_PATH:STRING=/usr/include"
-    cmake_options+=" -DTK_LIBRARY:STRING=/usr/lib/libtk${tcl_version}.so"
-    cmake_options+=" -DTK_WISH:STRING=/usr/bin/wish${tcl_version}"
-  else
-    cmake_options+=" -DVTK_WRAP_TCL:BOOL=OFF"
-  fi
-
-  # force usage of hdf5-1.8
-  local hdf5dir="/opt/hdf5-1.8"
-  cmake_options+=" -DHDF5_C_COMPILER_EXECUTABLE=${hdf5dir}/bin/h5cc"
-  cmake_options+=" -DHDF5_C_INCLUDE_DIR=${hdf5dir}/include"
-  cmake_options+=" -DHDF5_DIFF_EXECUTABLE=${hdf5dir}/bin/h5diff"
-  cmake_options+=" -DHDF5_HL_INCLUDE_DIR=${hdf5dir}/include"
-  cmake_options+=" -DHDF5_hdf5_LIBRARY_RELEASE=${hdf5dir}/lib/libhdf5.so"
-  cmake_options+=" -DHDF5_hdf5_hl_LIBRARY_RELEASE=${hdf5dir}/lib/libhdf5_hl.so"
+  # local tcl_version="8.6"
+  # cmake_options+=" -DVTK_WRAP_TCL:BOOL=ON"
+  # cmake_options+=" -DTCL_INCLUDE_PATH:STRING=/usr/include"
+  # cmake_options+=" -DTCL_LIBRARY:STRING=/usr/lib/libtcl${tcl_version}.so"
+  # cmake_options+=" -DTCL_TCLSH:STRING=/usr/bin/tclsh${tcl_version}"
+  # cmake_options+=" -DTK_INCLUDE_PATH:STRING=/usr/include"
+  # cmake_options+=" -DTK_LIBRARY:STRING=/usr/lib/libtk${tcl_version}.so"
+  # cmake_options+=" -DTK_WISH:STRING=/usr/bin/wish${tcl_version}"
+  cmake_options+=" -DVTK_WRAP_TCL:BOOL=OFF"
 
   # Java settings
   cmake_options+=" -DVTK_WRAP_JAVA:BOOL=OFF"
 
   # eigen settings
-  cmake_options+=" -DEigen_DIR=/usr/include/eigen3"
-
-  # MPI settings
-  cmake_options+=" -DPARAVIEW_USE_MPI:BOOL=OFF"
+  cmake_options+=" -DEigen_DIR:PATH=/usr/include/eigen3"
 
   # HDF5 settings
   cmake_options+=" -DVTK_USE_SYSTEM_HDF5:BOOL=ON"
-  cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_H5PartReader:BOOL=OFF"
-
-  # VisIt Database bridge settings
-  cmake_options+=" -DPARAVIEW_USE_VISITBRIDGE=ON"
+  cmake_options+=" -DHDF5_DIR:PATH=/usr/lib/hdf5_18/"
+  cmake_options+=" -DHDF5_INCLUDE_DIRS:PATH=/usr/include/hdf5_18/"
+  cmake_options+=" -DHDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5cc_18"
+  cmake_options+=" -DHDF5_C_LIBRARY_hdf5:FILEPATH=/usr/lib/hdf5_18/libhdf5.so"
+  cmake_options+=" -DHDF5_CXX_LIBRARY_hdf5:FILEPATH=/usr/lib/hdf5_18/libhdf5.so"
+  cmake_options+=" -DHDF5_C_LIBRARY_hdf5_hl:FILEPATH=/usr/lib/hdf5_18/libhdf5_hl.so"
+  cmake_options+=" -DHDF5_DIFF_EXECUTABLE:FILEPATH=/usr/bin/h5diff_18"
 
   # Boost settings
   cmake_options+=" -DBOOST_ROOT=/usr"
 
   # gl2ps settings
-  cmake_options+=" -DVTK_USE_SYSTEM_GL2PS:BOOL=OFF"
+  cmake_options+=" -DVTK_USE_SYSTEM_GL2PS:BOOL=ON"
 
   # libxml2 settings
   cmake_options+=" -DVTK_USE_SYSTEM_LIBXML2:BOOL=ON"
   cmake_options+=" -DLIBXML2_INCLUDE_DIR:STRING=/usr/include/libxml2"
   cmake_options+=" -DLIBXML2_LIBRARIES:STRING=/usr/lib/libxml2.so"
-
-  # freetype settings
-  cmake_options+=" -DVTK_USE_SYSTEM_FREETYPE:BOOL=ON"
+  cmake_options+=" -DLIBXML2_XMLLINT_EXECUTABLE:FILEPATH=/usr/bin/xmllint"
 
   # expat settings
   cmake_options+=" -DVTK_USE_SYSTEM_EXPAT:BOOL=ON"
-
   # jpeg settings
   cmake_options+=" -DVTK_USE_SYSTEM_JPEG:BOOL=ON"
-
   # tiff settings
   cmake_options+=" -DVTK_USE_SYSTEM_TIFF:BOOL=ON"
-
   # png settings
   cmake_options+=" -DVTK_USE_SYSTEM_PNG:BOOL=ON"
-
   # zlib settings
   cmake_options+=" -DVTK_USE_SYSTEM_ZLIB:BOOL=ON"
+  # freetype settings
+  cmake_options+=" -DVTK_USE_SYSTEM_FREETYPE:BOOL=ON"
+  cmake_options+=" -DFREETYPE_INCLUDE_DIRS:STRING=/usr/include/freetype2"
+  cmake_options+=" -DFREETYPE_LIBRARY:STRING=/usr/lib/libfreetype.so"
+
+  # Extra options since OCC presta to improve Paraview for Salome
+  cmake_options+=" -DPARAVIEW_USE_3DGLYPH:BOOL=OFF"
+  cmake_options+=" -DPARAVIEW_USE_EXTENDED_OPENFILEDIALOG:BOOL=ON"
+  cmake_options+=" -DPARAVIEW_USE_TIMECONTROL_SLIDER:BOOL=ON"
 
   # Extra options (switch off non-used Paraview plug-ins)
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_Moments:BOOL=OFF"
-  cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_PrismPlugin:BOOL=OFF"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_SLACTools:BOOL=OFF"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_SierraPlotTools:BOOL=OFF"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_PacMan:BOOL=OFF"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_MobileRemoteControl:BOOL=OFF"
-  cmake_options+=" -DPARAVIEW_ENABLE_COPROCESSING:BOOL=OFF"
   cmake_options+=" -DPARAVIEW_ENABLE_CATALYST:BOOL=OFF"
 
   # Extra options (switch on required Paraview plug-ins)
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting:BOOL=ON"
-  cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_ForceTime:BOOL=ON"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_H5PartReader:BOOL=ON"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_PointSprite:BOOL=ON"
   cmake_options+=" -DPARAVIEW_BUILD_PLUGIN_SurfaceLIC:BOOL=ON"
+  cmake_options+=" -DPARAVIEW_ENABLE_MATPLOTLIB:BOOL=ON"
 
   # use ffmpeg
   cmake_options+=" -DVTK_USE_MPEG2_ENCODER=OFF"
   cmake_options+=" -DVTK_USE_FFMPEG_ENCODER=ON"
   cmake_options+=" -DPARAVIEW_ENABLE_FFMPEG=ON"
-  
-  # flags to use ffmpeg-compat instead of ffmpeg
-  # cmake_options+=" -DFFMPEG_INCLUDE_DIR=/usr/include/ffmpeg-compat"
-  # cmake_options+=" -DFFMPEG_avcodec_LIBRARY=/usr/lib/ffmpeg-compat/libavcodec.so"
-  # cmake_options+=" -DFFMPEG_avformat_LIBRARY=/usr/lib/ffmpeg-compat/libavformat.so"
-  # cmake_options+=" -DFFMPEG_avutil_LIBRARY=/usr/lib/ffmpeg-compat/libavutil.so"
-  # cmake_options+=" -DFFMPEG_swscale_LIBRARY=/usr/lib/ffmpeg-compat/libswscale.so"
 
   # let's start
   cmake -Wno-dev \
         ${cmake_options} \
-	../ParaView-v${pkgver}-source
+	../ParaView-${pkgver}
 
   make
 }
@@ -205,20 +182,8 @@ package() {
 
   make DESTDIR="${pkgdir}" install
 
-  cd "${srcdir}"
-
   #Install missing cmake file
-  for _FILE in TopologicalSort.cmake
-  do
-    install -Dm644 `find ./ -name ${_FILE}` "${pkgdir}${_installdir}/lib/cmake/paraview-${pkgver:0:3}/"
-  done
-
-  #Install license
-  install -Dm644 "${srcdir}/ParaView-v${pkgver}-source/License_v1.2.txt" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
-
-  #Install desktop shortcuts
-  install -Dm644 "${srcdir}/${pkgname}.png" "${pkgdir}/usr/share/pixmaps/${pkgname}.png"
-  desktop-file-install --dir="${pkgdir}/usr/share/applications" "${srcdir}/${pkgname}.desktop"
+  cp -f "${srcdir}/build/VTK/VTKTargets.cmake" "${pkgdir}${_installdir}/lib/cmake/paraview-${pkgver:0:3}"
 
   # refers cmake files to _installdir
   cd "${pkgdir}${_installdir}/lib/cmake/paraview-${pkgver:0:3}"
@@ -230,14 +195,16 @@ package() {
   do
     sed -e "s|${srcdir}/build/bin|${_installdir}/bin|" -i "${_FILE}"
   done
-  sed -e "s|${srcdir}/ParaView-v${pkgver}/CMake|${_installdir}/lib/CMake|" -i ParaViewConfig.cmake
+  sed -e "s|${srcdir}/ParaView-${pkgver}/CMake|${_installdir}/lib/CMake|" -i ParaViewConfig.cmake
+
+  #Install license
+  install -Dm644 "${srcdir}/ParaView-${pkgver}/License_v1.2.txt" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
+
+  #Install desktop shortcuts
+  install -Dm644 "${srcdir}/${pkgname}.png" "${pkgdir}/usr/share/pixmaps/${pkgname}.png"
+  desktop-file-install --dir="${pkgdir}/usr/share/applications" "${srcdir}/${pkgname}.desktop"
 }
-md5sums=('77cf0e3804eb7bb91d2d94b10bd470f4'
+md5sums=('53c07c80009555d1ffc5e0bf13cfbf20'
          'db623002bc71a257ddfdd0c9c7b14c3f'
          'e3ba22be644f91da7018f429c3b7dd39'
-         'e034fc590bd332175dcd6bf126f14d97'
-         '12fa547d0c79ea6a780279712574a5fe'
-         '951e035583c784986a3cd5e7e35519e2'
-         '58055ab1dd936cc233120b10f4e7eaa7'
-         '3e4c48633eb337c42653f51e6112f347'
-         '2f3f049a703224ca230eadffd5016455')
+         'ec32574de308796bc8086a896eb8c2f9')
diff --git a/ParaView-4.2.0.patch b/ParaView-4.2.0.patch
deleted file mode 100644
index 843a06844e0b..000000000000
--- a/ParaView-4.2.0.patch
+++ /dev/null
@@ -1,1373 +0,0 @@
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/CMakeLists.txt ParaView-4.2.0_SRC.new/CMakeLists.txt
---- ParaView-4.2.0_SRC/CMakeLists.txt	2014-09-23 18:46:43.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/CMakeLists.txt	2014-12-19 15:39:41.000000000 +0300
-@@ -543,8 +543,8 @@
- 
-   #----------------------------------------------------------------------------------
-   # Set some flags that affect VTK's modules.
--  set (VTK_NO_PYTHON_THREADS 1 CACHE INTERNAL
--                               "Disable Python Threads support" FORCE)
-+  set (VTK_NO_PYTHON_THREADS ON CACHE BOOL 
-+                               "Disable Python Threads support")
-   set(VTK_WRAP_PYTHON ${PARAVIEW_ENABLE_PYTHON}
-     CACHE INTERNAL "Should VTK Python wrapping be built?" FORCE)
- 
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Core/vtkPVPythonInformation.cxx ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Core/vtkPVPythonInformation.cxx
---- ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Core/vtkPVPythonInformation.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Core/vtkPVPythonInformation.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -100,7 +100,9 @@
- namespace {
- bool hasModule(const char *module)
- {
-+  VTK_PY_GIL_ENSURE
-   vtkSmartPyObject mod(PyImport_ImportModule(module));
-+  VTK_PY_GIL_RELEASE
-   bool result = mod;
-   return result;
- }
-@@ -108,11 +110,13 @@
- // Returns empty string on error.
- std::string getModuleAttrAsString(const char *module, const char *attribute)
- {
-+  VTK_PY_GIL_ENSURE
-   vtkSmartPyObject mod(PyImport_ImportModule(module));
-   if (!mod)
-     {
-     std::ostringstream result;
-     result << "(module '" << module << "' not found)";
-+    VTK_PY_GIL_RELEASE
-     return result.str();
-     }
- 
-@@ -122,11 +126,13 @@
-     std::ostringstream result;
-     result << "('" << module << "' module found, missing '" << attribute
-            << "' attribute)";
-+    VTK_PY_GIL_RELEASE
-     return result.str();
-     }
- 
-   std::string result = PyBytes_AsString(attr);
- 
-+  VTK_PY_GIL_RELEASE
-   return result;
- }
- 
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Core/vtkSession.cxx ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Core/vtkSession.cxx
---- ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Core/vtkSession.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Core/vtkSession.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -30,13 +30,15 @@
- //----------------------------------------------------------------------------
- void vtkSession::Activate()
- {
--  vtkProcessModule::GetProcessModule()->PushActiveSession(this);
-+  if(vtkProcessModule::GetProcessModule())
-+    vtkProcessModule::GetProcessModule()->PushActiveSession(this);
- }
- 
- //----------------------------------------------------------------------------
- void vtkSession::DeActivate()
- {
--  vtkProcessModule::GetProcessModule()->PopActiveSession(this);
-+  if(vtkProcessModule::GetProcessModule())
-+    vtkProcessModule::GetProcessModule()->PopActiveSession(this);
- }
- 
- //----------------------------------------------------------------------------
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx
---- ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -172,6 +172,7 @@
-   if (geomFilter)
-     {
-     geomFilter->SetUseOutline(0);
-+    geomFilter->SetTriangulate(0);
-     geomFilter->SetNonlinearSubdivisionLevel(1);
-     geomFilter->SetPassThroughCellIds(1);
-     geomFilter->SetPassThroughPointIds(1);
-@@ -236,7 +237,7 @@
-     vtkPVRenderView::MarkAsRedistributable(inInfo, this);
- 
-     // Tell the view if this representation needs ordered compositing. We need
--    // ordered compositing when rendering translucent geometry. 
-+    // ordered compositing when rendering translucent geometry.
-     if (this->Actor->HasTranslucentPolygonalGeometry())
-       {
-       // We need to extend this condition to consider translucent LUTs once we
-@@ -270,7 +271,7 @@
-         this->LODOutlineFilter->Update();
-         // Pass along the LOD geometry to the view so that it can deliver it to
-         // the rendering node as and when needed.
--        vtkPVRenderView::SetPieceLOD(inInfo, this, 
-+        vtkPVRenderView::SetPieceLOD(inInfo, this,
-           this->LODOutlineFilter->GetOutputDataObject(0));
-         }
-       else
-@@ -290,7 +291,7 @@
- 
-         // Pass along the LOD geometry to the view so that it can deliver it to
-         // the rendering node as and when needed.
--        vtkPVRenderView::SetPieceLOD(inInfo, this, 
-+        vtkPVRenderView::SetPieceLOD(inInfo, this,
-           this->Decimator->GetOutputDataObject(0));
-         }
-       }
-@@ -780,6 +781,19 @@
- }
- 
- //----------------------------------------------------------------------------
-+void vtkGeometryRepresentation::SetTriangulate(int val)
-+{
-+  if (vtkPVGeometryFilter::SafeDownCast(this->GeometryFilter))
-+    {
-+    vtkPVGeometryFilter::SafeDownCast(this->GeometryFilter)->SetTriangulate(val);
-+    }
-+
-+  // since geometry filter needs to execute, we need to mark the representation
-+  // modified.
-+  this->MarkModified();
-+}
-+
-+//----------------------------------------------------------------------------
- void vtkGeometryRepresentation::SetNonlinearSubdivisionLevel(int val)
- {
-   if (vtkPVGeometryFilter::SafeDownCast(this->GeometryFilter))
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.h ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.h
---- ParaView-4.2.0_SRC/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.h	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.h	2014-12-19 15:39:41.000000000 +0300
-@@ -19,7 +19,7 @@
- // It handles non-polygonal datasets by extracting external surfaces. One can
- // use this representation to show surface/wireframe/points/surface-with-edges.
- // .SECTION Thanks
--// The addition of a transformation matrix was supported by CEA/DIF 
-+// The addition of a transformation matrix was supported by CEA/DIF
- // Commissariat a l'Energie Atomique, Centre DAM Ile-De-France, Arpajon, France.
- 
- #ifndef __vtkGeometryRepresentation_h
-@@ -109,7 +109,7 @@
-   // Description:
-   // Returns true if this class would like to get ghost-cells if available for
-   // the connection whose information object is passed as the argument.
--  static bool DoRequestGhostCells(vtkInformation* information); 
-+  static bool DoRequestGhostCells(vtkInformation* information);
- 
-   // Description:
-   // Representations that use geometry representation as the internal
-@@ -122,6 +122,7 @@
-   //***************************************************************************
-   // Forwarded to vtkPVGeometryFilter
-   virtual void SetUseOutline(int);
-+  void SetTriangulate(int);
-   void SetNonlinearSubdivisionLevel(int);
- 
-   //***************************************************************************
-@@ -145,7 +146,7 @@
-   virtual void SetPosition(double, double, double);
-   virtual void SetScale(double, double, double);
-   virtual void SetTexture(vtkTexture*);
--  virtual void SetUserTransform(const double[16]); 
-+  virtual void SetUserTransform(const double[16]);
- 
-   //***************************************************************************
-   // Forwarded to Mapper and LODMapper.
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ServerManager/Core/vtkSMTrace.cxx ParaView-4.2.0_SRC.new/ParaViewCore/ServerManager/Core/vtkSMTrace.cxx
---- ParaView-4.2.0_SRC/ParaViewCore/ServerManager/Core/vtkSMTrace.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ServerManager/Core/vtkSMTrace.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -69,6 +69,7 @@
- #ifdef PARAVIEW_ENABLE_PYTHON
-   // ensure Python interpreter is initialized.
-   vtkPythonInterpreter::Initialize();
-+  VTK_PY_GIL_ENSURE
-   this->Internals->TraceModule.TakeReference(PyImport_ImportModule("paraview.smtrace"));
-   if (!this->Internals->TraceModule)
-     {
-@@ -92,6 +93,7 @@
-       this->Internals->CreateItemFunction.TakeReference(NULL);
-       }
-     }
-+  VTK_PY_GIL_RELEASE
- #endif
- }
- 
-@@ -115,12 +117,15 @@
- 
- #ifdef PARAVIEW_ENABLE_PYTHON
-   vtkPythonInterpreter::Initialize();
-+  VTK_PY_GIL_ENSURE
-   try
-     {
-+
-     vtkSmartPyObject module(PyImport_ImportModule("paraview.smstate"));
-     if (!module || PyErr_Occurred())
-       {
-       vtkGenericWarningMacro("Failed to import paraview.smstate module.");
-+      VTK_PY_GIL_RELEASE
-       throw 1;
-       }
- 
-@@ -132,9 +137,12 @@
-     if (!result || PyErr_Occurred())
-       {
-       vtkGenericWarningMacro("Failed to generate state.");
-+      VTK_PY_GIL_RELEASE
-       throw 1;
-       }
--    return vtkStdString(PyString_AsString(result));
-+    vtkStdString s(PyString_AsString(result));
-+    VTK_PY_GIL_RELEASE
-+    return s;
-     }
-   catch (int)
-     {
-@@ -144,6 +152,7 @@
-       PyErr_Clear();
-       }
-     }
-+  VTK_PY_GIL_RELEASE
- #endif
-   (void)propertiesToTraceOnCreate;
-   (void)skipHiddenRepresentations;
-@@ -164,9 +173,11 @@
-       }
-     else
-       {
-+      VTK_PY_GIL_ENSURE
-       vtkSmartPyObject _start_trace_internal(
-         PyObject_CallMethod(vtkSMTrace::ActiveTracer->GetTraceModule(),
-           const_cast<char*>("_start_trace_internal"), NULL));
-+      VTK_PY_GIL_RELEASE
-       vtkSMTrace::ActiveTracer->CheckForError();
-       }
- #endif
-@@ -192,6 +203,7 @@
-   vtkSMTrace::ActiveTracer = NULL;
- 
- #ifdef PARAVIEW_ENABLE_PYTHON
-+  VTK_PY_GIL_ENSURE
-   vtkSmartPyObject _stop_trace_internal(
-     PyObject_CallMethod(active->GetTraceModule(), const_cast<char*>("_stop_trace_internal"), NULL));
-   if (active->CheckForError() == false)
-@@ -199,14 +211,18 @@
-     // no error.
-     if (Py_None != _stop_trace_internal.GetPointer() && _stop_trace_internal.GetPointer() != NULL)
-       {
--      return vtkStdString(PyString_AsString(_stop_trace_internal));
-+       vtkStdString s(PyString_AsString(_stop_trace_internal));
-+       VTK_PY_GIL_RELEASE
-+       return s;
-       }
-     else
-       {
-       vtkGenericWarningMacro("Empty trace returned!!!");
-+      VTK_PY_GIL_RELEASE
-       return vtkStdString();
-       }
-     }
-+  VTK_PY_GIL_RELEASE
- #endif
-   return vtkStdString();
- }
-@@ -223,13 +239,17 @@
- 
- #ifdef PARAVIEW_ENABLE_PYTHON
-   vtkSMTrace* active = vtkSMTrace::ActiveTracer;
-+  VTK_PY_GIL_ENSURE
-   vtkSmartPyObject get_current_trace_output(
-     PyObject_CallMethod(active->GetTraceModule(), const_cast<char*>("get_current_trace_output"), NULL));
-   if (active->CheckForError() == false && get_current_trace_output)
-     {
-     // no error.
--    return vtkStdString(PyString_AsString(get_current_trace_output));
-+    vtkStdString s(PyString_AsString(get_current_trace_output));
-+    VTK_PY_GIL_RELEASE
-+    return s;
-     }
-+  VTK_PY_GIL_RELEASE
- #endif
-   return vtkStdString();
- }
-@@ -256,6 +276,7 @@
- bool vtkSMTrace::CheckForError()
- {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+  VTK_PY_GIL_ENSURE
-   PyObject *exception = PyErr_Occurred();
-   if (exception)
-     {
-@@ -264,12 +285,15 @@
-       // catch Untraceable exceptions. We can log them when debugging is
-       // enabled.
-       PyErr_Clear();
-+      VTK_PY_GIL_RELEASE
-       return false;
-       }
-     PyErr_Print();
-     PyErr_Clear();
-+    VTK_PY_GIL_RELEASE
-     return true;
-     }
-+  VTK_PY_GIL_RELEASE
- #endif
-   return false;
- }
-@@ -336,6 +360,7 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject keyObj(PyString_FromString(key));
-     vtkSmartPyObject valObj(vtkPythonUtil::GetObjectFromPointer(val));
-     assert(valObj && keyObj);
-@@ -343,6 +368,7 @@
-     int ret = PyDict_SetItem(this->Internals->GetKWArgs(), keyObj, valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)key;
-@@ -358,6 +384,7 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject keyObj(PyString_FromString(key));
-     vtkSmartPyObject valObj;
-     if (val == NULL)
-@@ -374,6 +401,7 @@
-     int ret = PyDict_SetItem(this->Internals->GetKWArgs(), keyObj, valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)key;
-@@ -389,6 +417,7 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject keyObj(PyString_FromString(key));
-     vtkSmartPyObject valObj(PyInt_FromLong(val));
-     assert(keyObj && valObj);
-@@ -396,6 +425,7 @@
-     int ret = PyDict_SetItem(this->Internals->GetKWArgs(), keyObj, valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)key;
-@@ -411,6 +441,7 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject keyObj(PyString_FromString(key));
-     vtkSmartPyObject valObj(PyFloat_FromDouble(val));
-     assert(keyObj && valObj);
-@@ -418,6 +449,7 @@
-     int ret = PyDict_SetItem(this->Internals->GetKWArgs(), keyObj, valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)key;
-@@ -432,6 +464,7 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject keyObj(PyString_FromString(key));
-     vtkSmartPyObject valObj(PyBool_FromLong(val? 1 : 0));
-     assert(keyObj && valObj);
-@@ -439,6 +472,7 @@
-     int ret = PyDict_SetItem(this->Internals->GetKWArgs(), keyObj, valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)key;
-@@ -452,11 +486,13 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject valObj(vtkPythonUtil::GetObjectFromPointer(val));
-     assert(valObj);
-     int ret = PyList_Append(this->Internals->GetPositionalArgs(), valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)val;
-@@ -470,11 +506,13 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject valObj(PyString_FromString(val));
-     assert(valObj);
-     int ret = PyList_Append(this->Internals->GetPositionalArgs(), valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)val;
-@@ -487,11 +525,13 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject valObj(PyInt_FromLong(val));
-     assert(valObj);
-     int ret = PyList_Append(this->Internals->GetPositionalArgs(), valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)val;
-@@ -504,11 +544,13 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject valObj(PyFloat_FromDouble(val));
-     assert(valObj);
-     int ret = PyList_Append(this->Internals->GetPositionalArgs(), valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)val;
-@@ -521,11 +563,13 @@
-   if (vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject valObj(PyBool_FromLong(val? 1 : 0));
-     assert(valObj);
-     int ret = PyList_Append(this->Internals->GetPositionalArgs(), valObj);
-     (void)ret;
-     assert(ret == 0);
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)val;
-@@ -557,9 +601,11 @@
-   vtkSMTrace* tracer = vtkSMTrace::GetActiveTracer();
-   if (tracer && this->Internals->PyItem)
-     {
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject reply(
-       PyObject_CallMethod(this->Internals->PyItem,
-         const_cast<char*>("finalize"), NULL));
-+    VTK_PY_GIL_RELEASE
-     tracer->CheckForError();
-     tracer->InvokeEvent(vtkCommand::UpdateEvent);
-     }
-@@ -583,6 +629,7 @@
-   if (vtkSMTrace* tracer = vtkSMTrace::GetActiveTracer())
-     {
- #ifdef PARAVIEW_ENABLE_PYTHON
-+    VTK_PY_GIL_ENSURE
-     assert(tracer->GetTraceModule());
-     assert(tracer->GetCreateItemFunction());
- 
-@@ -613,6 +660,7 @@
-     this->Internals->PyItem.TakeReference(
-       PyObject_Call(tracer->GetCreateItemFunction(), args, NULL));
-     tracer->CheckForError();
-+    VTK_PY_GIL_RELEASE
- #endif
-     }
-   (void)arguments;
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ServerManager/Rendering/vtkSMPVRepresentationProxy.cxx ParaView-4.2.0_SRC.new/ParaViewCore/ServerManager/Rendering/vtkSMPVRepresentationProxy.cxx
---- ParaView-4.2.0_SRC/ParaViewCore/ServerManager/Rendering/vtkSMPVRepresentationProxy.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ServerManager/Rendering/vtkSMPVRepresentationProxy.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -276,7 +276,7 @@
- {
-   if (!info)
-     {
--    vtkWarningMacro("Could not determine array range.");
-+    // vtkWarningMacro("Could not determine array range.");
-     return false;
-     }
- 
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/ServerManager/SMApplication/Resources/views_and_representations.xml ParaView-4.2.0_SRC.new/ParaViewCore/ServerManager/SMApplication/Resources/views_and_representations.xml
---- ParaView-4.2.0_SRC/ParaViewCore/ServerManager/SMApplication/Resources/views_and_representations.xml	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/ServerManager/SMApplication/Resources/views_and_representations.xml	2014-12-19 15:39:41.000000000 +0300
-@@ -2044,16 +2044,14 @@
-       <IntVectorProperty command="SetStereoRender"
-                          default_values="0"
-                          name="StereoRender"
--                         number_of_elements="1"
--                         is_internal="1">
-+                         number_of_elements="1">
-         <BooleanDomain name="bool" />
-       </IntVectorProperty>
-       <IntVectorProperty command="SetStereoType"
-                          default_values="3"
-                          name="StereoType"
-                          panel_visibility="never"
--                         number_of_elements="1"
--                         is_internal="1">
-+                         number_of_elements="1">
-         <EnumerationDomain name="enum">
-           <Entry text="Crystal Eyes"
-                  value="1" />
-@@ -3139,6 +3137,8 @@
-                       panel_visibility="advanced" />
-             <Property name="UserTransform"
-                       panel_visibility="never" />
-+            <Property name="Triangulate"
-+                      panel_visibility="advanced" />
-             <Property name="NonlinearSubdivisionLevel"
-                       panel_visibility="advanced" />
-             <Property name="BlockVisibility"
-@@ -8229,6 +8229,15 @@
-           <!--<Entry value="2" text="Phong" />-->
-         </EnumerationDomain>
-       </IntVectorProperty>
-+      <IntVectorProperty command="SetTriangulate"
-+                         default_values="0"
-+                         name="Triangulate"
-+                         number_of_elements="1">
-+        <BooleanDomain name="bool" />
-+        <Documentation>Triangulate the geometry internally to avoid rendering
-+        issues of non-convex polygons. This feature has a processing and memory
-+        cost, it should be enabled only when needed.</Documentation>
-+      </IntVectorProperty>
-       <IntVectorProperty command="SetNonlinearSubdivisionLevel"
-                          default_values="1"
-                          name="NonlinearSubdivisionLevel"
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/VTKExtensions/Default/vtkPVImageReader.h ParaView-4.2.0_SRC.new/ParaViewCore/VTKExtensions/Default/vtkPVImageReader.h
---- ParaView-4.2.0_SRC/ParaViewCore/VTKExtensions/Default/vtkPVImageReader.h	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/VTKExtensions/Default/vtkPVImageReader.h	2014-12-19 15:39:41.000000000 +0300
-@@ -19,27 +19,15 @@
- 
- #include "vtkPVVTKExtensionsDefaultModule.h" //needed for exports
- 
--#ifdef PARAVIEW_USE_MPI
--#include "vtkMPIImageReader.h"
--#else
- #include "vtkImageReader.h"
--#endif
- 
--class VTKPVVTKEXTENSIONSDEFAULT_EXPORT vtkPVImageReader : public
--#ifdef PARAVIEW_USE_MPI
--vtkMPIImageReader
--#else
--vtkImageReader
--#endif
-+class VTKPVVTKEXTENSIONSDEFAULT_EXPORT vtkPVImageReader : public vtkImageReader
- {
- public:
-   static vtkPVImageReader* New();
- 
--#ifdef PARAVIEW_USE_MPI
--  vtkTypeMacro(vtkPVImageReader, vtkMPIImageReader);
--#else
-+
-   vtkTypeMacro(vtkPVImageReader, vtkImageReader);
--#endif
- 
-   void PrintSelf(ostream& os, vtkIndent indent);
- 
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.cxx ParaView-4.2.0_SRC.new/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.cxx
---- ParaView-4.2.0_SRC/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -64,6 +64,7 @@
- #include "vtkStructuredGrid.h"
- #include "vtkStructuredGridOutlineFilter.h"
- #include "vtkTimerLog.h"
-+#include "vtkTriangleFilter.h"
- #include "vtkUniformGrid.h"
- #include "vtkUnsignedCharArray.h"
- #include "vtkUnsignedIntArray.h"
-@@ -78,8 +79,6 @@
- #include <set>
- #include <algorithm>
- 
--#define VTK_CREATE(type, name) \
--  vtkSmartPointer<type> name = vtkSmartPointer<type>::New()
- 
- vtkStandardNewMacro(vtkPVGeometryFilter);
- vtkCxxSetObjectMacro(vtkPVGeometryFilter, Controller, vtkMultiProcessController);
-@@ -149,6 +148,7 @@
-   this->UseOutline = 1;
-   this->UseStrips = 0;
-   this->GenerateCellNormals = 1;
-+  this->Triangulate = false;
-   this->NonlinearSubdivisionLevel = 1;
- 
-   this->DataSetSurfaceFilter = vtkDataSetSurfaceFilter::New();
-@@ -1348,8 +1348,8 @@
-     {
-     this->OutlineFlag = 0;
- 
--    bool handleSubdivision = false;
--    if (this->NonlinearSubdivisionLevel > 0)
-+    bool handleSubdivision = (this->Triangulate != 0);
-+    if (!handleSubdivision && (this->NonlinearSubdivisionLevel > 0))
-       {
-       // Check to see if the data actually has nonlinear cells.  Handling
-       // nonlinear cells adds unnecessary work if we only have linear cells.
-@@ -1445,6 +1445,16 @@
-       this->DataSetSurfaceFilter->UnstructuredGridExecute(input, output, updateghostlevel);
-       }
- 
-+    if (this->Triangulate && (output->GetNumberOfPolys() > 0))
-+      {
-+      // Triangulate the polygonal mesh if requested to avoid rendering
-+      // issues of non-convex polygons.
-+      vtkNew<vtkTriangleFilter> triangleFilter;
-+      triangleFilter->SetInputData(output);
-+      triangleFilter->Update();
-+      output->ShallowCopy(triangleFilter->GetOutput());
-+      }
-+
-     if (handleSubdivision)
-       {
-       // Restore state of DataSetSurfaceFilter.
-@@ -1456,9 +1466,9 @@
- 
-       // Now use vtkPVRecoverGeometryWireframe to create an edge flag attribute
-       // that will cause the wireframe to be rendered correctly.
--      VTK_CREATE(vtkPolyData, nextStageInput);
-+      vtkNew<vtkPolyData> nextStageInput;
-       nextStageInput->ShallowCopy(output);  // Yes output is correct.
--      this->RecoverWireframeFilter->SetInputData(nextStageInput);
-+      this->RecoverWireframeFilter->SetInputData(nextStageInput.Get());
- 
-       // Observe the progress of the internal filter.
-       // TODO: Make the consecutive internal filter execution have monotonically
-@@ -1489,7 +1499,7 @@
-           return;
-           }
-         vtkIdType numPts = polyPtIds2FacePtIds->GetNumberOfTuples();
--        VTK_CREATE(vtkIdTypeArray, polyPtIds2OriginalPtIds);
-+        vtkNew<vtkIdTypeArray> polyPtIds2OriginalPtIds;
-         polyPtIds2OriginalPtIds->SetName("vtkOriginalPointIds");
-         polyPtIds2OriginalPtIds->SetNumberOfComponents(1);
-         polyPtIds2OriginalPtIds->SetNumberOfTuples(numPts);
-@@ -1503,7 +1513,7 @@
-             }
-           polyPtIds2OriginalPtIds->SetValue(polyPtId, originalPtId);
-           }
--        output->GetPointData()->AddArray(polyPtIds2OriginalPtIds);
-+        output->GetPointData()->AddArray(polyPtIds2OriginalPtIds.Get());
-         }
-       }
- 
-@@ -1518,7 +1528,7 @@
- 
- //----------------------------------------------------------------------------
- void vtkPVGeometryFilter::PolyDataExecute(
--  vtkPolyData* input, vtkPolyData* out, int doCommunicate)
-+  vtkPolyData* input, vtkPolyData* output, int doCommunicate)
- {
-   if (!this->UseOutline)
-     {
-@@ -1533,54 +1543,90 @@
-       inCopy->RemoveGhostCells(1);
-       stripper->SetInputData(inCopy);
-       stripper->Update();
--      out->CopyStructure(stripper->GetOutput());
--      out->GetPointData()->ShallowCopy(stripper->GetOutput()->GetPointData());
--      out->GetCellData()->ShallowCopy(stripper->GetOutput()->GetCellData());
-+      output->CopyStructure(stripper->GetOutput());
-+      output->GetPointData()->ShallowCopy(stripper->GetOutput()->GetPointData());
-+      output->GetCellData()->ShallowCopy(stripper->GetOutput()->GetCellData());
-       inCopy->Delete();
-       stripper->Delete();
-       }
-     else
-       {
--      out->ShallowCopy(input);
-+      output->ShallowCopy(input);
-       if (this->PassThroughCellIds)
-         {
--        vtkIdTypeArray *originalCellIds = vtkIdTypeArray::New();
-+        vtkNew<vtkIdTypeArray> originalCellIds;
-         originalCellIds->SetName("vtkOriginalCellIds");
-         originalCellIds->SetNumberOfComponents(1);
--        vtkCellData *outputCD = out->GetCellData();
--        outputCD->AddArray(originalCellIds);
--        vtkIdType numTup = out->GetNumberOfCells();
-+        vtkNew<vtkIdTypeArray> originalFaceIds;
-+        originalFaceIds->SetName(vtkPVRecoverGeometryWireframe::ORIGINAL_FACE_IDS());
-+        originalFaceIds->SetNumberOfComponents(1);
-+        vtkCellData *outputCD = output->GetCellData();
-+        outputCD->AddArray(originalCellIds.Get());
-+        if (this->Triangulate)
-+          {
-+          outputCD->AddArray(originalFaceIds.Get());
-+          }
-+        vtkIdType numTup = output->GetNumberOfCells();
-         originalCellIds->SetNumberOfValues(numTup);
-+        originalFaceIds->SetNumberOfValues(numTup);
-         for (vtkIdType cId = 0; cId < numTup; cId++)
-           {
-           originalCellIds->SetValue(cId, cId);
-+          originalFaceIds->SetValue(cId, cId);
-           }
--        originalCellIds->Delete();
--        originalCellIds = NULL;
-         }
-       if (this->PassThroughPointIds)
-         {
--        vtkIdTypeArray *originalPointIds = vtkIdTypeArray::New();
-+        vtkNew<vtkIdTypeArray> originalPointIds;
-         originalPointIds->SetName("vtkOriginalPointIds");
-         originalPointIds->SetNumberOfComponents(1);
--        vtkPointData *outputPD = out->GetPointData();
--        outputPD->AddArray(originalPointIds);
--        vtkIdType numTup = out->GetNumberOfPoints();
-+        vtkPointData *outputPD = output->GetPointData();
-+        outputPD->AddArray(originalPointIds.Get());
-+        vtkIdType numTup = output->GetNumberOfPoints();
-         originalPointIds->SetNumberOfValues(numTup);
-         for (vtkIdType pId = 0; pId < numTup; pId++)
-           {
-           originalPointIds->SetValue(pId, pId);
-           }
--        originalPointIds->Delete();
--        originalPointIds = NULL;
-         }
--      out->RemoveGhostCells(1);
-+
-+      output->RemoveGhostCells(1);
-+
-+      if (this->Triangulate)
-+        {
-+        // Triangulate the polygonal mesh.
-+        vtkNew<vtkTriangleFilter> triangleFilter;
-+        triangleFilter->SetInputData(output);
-+        triangleFilter->Update();
-+
-+        // Now use vtkPVRecoverGeometryWireframe to create an edge flag attribute
-+        // that will cause the wireframe to be rendered correctly.
-+        this->RecoverWireframeFilter->SetInputData(triangleFilter->GetOutput());
-+
-+        // Observe the progress of the internal filter.
-+        // TODO: Make the consecutive internal filter execution have monotonically
-+        // increasing progress rather than restarting for every internal filter.
-+        this->RecoverWireframeFilter->AddObserver(
-+          vtkCommand::ProgressEvent,
-+          this->InternalProgressObserver);
-+        this->RecoverWireframeFilter->Update();
-+        // The internal filter finished.  Remove the observer.
-+        this->RecoverWireframeFilter->RemoveObserver(
-+          this->InternalProgressObserver);
-+
-+        this->RecoverWireframeFilter->SetInputData(NULL);
-+
-+        // Get what should be the final output.
-+        output->ShallowCopy(this->RecoverWireframeFilter->GetOutput());
-+
-+        output->GetCellData()->RemoveArray(vtkPVRecoverGeometryWireframe::ORIGINAL_FACE_IDS());
-+        }
-       }
-     return;
-     }
- 
-   this->OutlineFlag = 1;
--  this->DataSetExecute(input, out, doCommunicate);
-+  this->DataSetExecute(input, output, doCommunicate);
- }
- 
- //----------------------------------------------------------------------------
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.h ParaView-4.2.0_SRC.new/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.h
---- ParaView-4.2.0_SRC/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.h	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/ParaViewCore/VTKExtensions/Rendering/vtkPVGeometryFilter.h	2014-12-19 15:39:41.000000000 +0300
-@@ -85,6 +85,13 @@
-   vtkBooleanMacro(GenerateCellNormals, int);
- 
-   // Description:
-+  // Whether to triangulate mesh for rendering. This parameter avoid
-+  // rendering issues of non-convex polygons.
-+  vtkSetMacro(Triangulate, int);
-+  vtkGetMacro(Triangulate, int);
-+  vtkBooleanMacro(Triangulate, int);
-+
-+  // Description:
-   // Nonlinear faces are approximated with flat polygons.  This parameter
-   // controls how many times to subdivide nonlinear surface cells.  Higher
-   // subdivisions generate closer approximations but take more memory and
-@@ -101,8 +108,7 @@
-   // Description:
-   // If on, the output polygonal dataset will have a celldata array that
-   // holds the cell index of the original 3D cell that produced each output
--  // cell. This is useful for picking. The default is off to conserve
--  // memory.
-+  // cell. This is useful for picking but it takes memory. The default is on.
-   void SetPassThroughCellIds(int);
-   vtkGetMacro(PassThroughCellIds,int);
-   vtkBooleanMacro(PassThroughCellIds,int);
-@@ -110,8 +116,7 @@
-   // Description:
-   // If on, the output polygonal dataset will have a pointdata array that
-   // holds the point index of the original vertex that produced each output
--  // vertex. This is useful for picking. The default is off to conserve
--  // memory.
-+  // vertex. This is useful for picking but it takes memory. The default is on.
-   void SetPassThroughPointIds(int);
-   vtkGetMacro(PassThroughPointIds,int);
-   vtkBooleanMacro(PassThroughPointIds,int);
-@@ -176,7 +181,7 @@
-   virtual vtkExecutive* CreateDefaultExecutive();
- 
-   // Description:
--  // Produce geometry for a block in the dataset. 
-+  // Produce geometry for a block in the dataset.
-   // This does not handle producing outlines. Call only when this->UseOutline ==
-   // 0; \c extractface mask it is used to determine external faces.
-   void ExecuteAMRBlock(vtkUniformGrid* input,
-@@ -250,6 +255,7 @@
-   int UseOutline;
-   int UseStrips;
-   int GenerateCellNormals;
-+  int Triangulate;
-   int NonlinearSubdivisionLevel;
- 
-   vtkMultiProcessController* Controller;
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Qt/Components/pqPropertiesPanel.cxx ParaView-4.2.0_SRC.new/Qt/Components/pqPropertiesPanel.cxx
---- ParaView-4.2.0_SRC/Qt/Components/pqPropertiesPanel.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Qt/Components/pqPropertiesPanel.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -383,6 +383,14 @@
-   this->Internals->Ui.DisplayButton->setVisible(has_multiples_types && has_display);
-   this->Internals->Ui.ViewButton->setVisible(has_multiples_types && has_view);
- 
-+  // added to avoid unwanted save restore buttons
-+  this->Internals->Ui.PropertiesSaveAsDefaults->setVisible(has_source);
-+  this->Internals->Ui.PropertiesRestoreDefaults->setVisible(has_source);
-+  this->Internals->Ui.DisplaySaveAsDefaults->setVisible(has_display);
-+  this->Internals->Ui.DisplayRestoreDefaults->setVisible(has_display);
-+  this->Internals->Ui.ViewSaveAsDefaults->setVisible(has_view);
-+  this->Internals->Ui.ViewRestoreDefaults->setVisible(has_view);
-+  
-   this->updatePanel();
- }
- 
-@@ -593,14 +601,15 @@
- }
- 
- //-----------------------------------------------------------------------------
--void pqPropertiesPanel::updateViewPanel (pqView* _view)
-+void pqPropertiesPanel::updateViewPanel (pqView* argView)
- {
-+  pqView* _view = argView;
-   if ( (this->PanelMode & pqPropertiesPanel::VIEW_PROPERTIES) == 0)
-     {
-     _view = NULL;
-     }
- 
--  if (this->Internals->View != _view)
-+  if (this->Internals->View != argView)
-     {
-     // The view has changed.
-     if (this->Internals->View)
-@@ -611,8 +620,8 @@
-         delete this->Internals->ViewWidgets;
-         }
-       }
--    this->Internals->View = _view;
--    emit this->viewChanged(_view);
-+    this->Internals->View = argView;
-+    emit this->viewChanged(argView);
-     if (_view)
-       {
-       // create the widgets for this view
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Qt/Python/pqPythonShell.cxx ParaView-4.2.0_SRC.new/Qt/Python/pqPythonShell.cxx
---- ParaView-4.2.0_SRC/Qt/Python/pqPythonShell.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Qt/Python/pqPythonShell.cxx	2014-12-19 15:40:01.000000000 +0300
-@@ -118,6 +118,7 @@
-   /// string list.
-   QStringList getPythonAttributes(const QString& pythonObjectName)
-     {
-+    VTK_PY_GIL_ENSURE
-     if (this->Interpreter == NULL ||
-       this->Interpreter->GetInteractiveConsoleLocalsPyObject() == NULL)
-       {
-@@ -191,7 +192,7 @@
-         }
-       Py_DECREF(object);
-       }
--
-+    VTK_PY_GIL_RELEASE
-     return results;
-     }
- };
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Qt/Python/pqPythonSyntaxHighlighter.cxx ParaView-4.2.0_SRC.new/Qt/Python/pqPythonSyntaxHighlighter.cxx
---- ParaView-4.2.0_SRC/Qt/Python/pqPythonSyntaxHighlighter.cxx	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Qt/Python/pqPythonSyntaxHighlighter.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -65,6 +65,7 @@
-   this->Internals->TextEdit = textEdit;
-   this->Internals->TextEdit->installEventFilter(this);
-   vtkPythonInterpreter::Initialize();
-+  VTK_PY_GIL_ENSURE
-   this->Internals->PygmentsModule.TakeReference(PyImport_ImportModule("pygments"));
-   if (this->Internals->PygmentsModule && this->Internals->TextEdit != NULL)
-   {
-@@ -99,6 +100,7 @@
-     this->connect(this->Internals->TextEdit.data(), SIGNAL(textChanged()),
-                   this, SLOT(rehighlightSyntax()));
-   }
-+  VTK_PY_GIL_RELEASE
-   this->Internals->IsSyntaxHighlighting = false;
-   // Replace tabs with 4 spaces
-   this->Internals->ReplaceTabs = true;
-@@ -175,10 +177,12 @@
-     }
-     QString leadingWhitespace = text.left(leadingWhiteSpaceLength);
-     QString trailingWhitespace = text.right(trailingWhiteSpaceLength);
-+    VTK_PY_GIL_ENSURE
-     vtkSmartPyObject args(Py_BuildValue("sOO",text.trimmed().toStdString().c_str(),
-                                        this->Internals->PythonLexer.GetPointer(),this->Internals->HtmlFormatter.GetPointer()));
-     vtkSmartPyObject resultingText(PyObject_Call(this->Internals->HighlightFunction,args,NULL));
-     const char *resultingTextAsCString = PyString_AsString(resultingText);
-+    VTK_PY_GIL_RELEASE
-     QString pygmentsOutput(resultingTextAsCString);
-     // the first span tag always should follow the pre tag like this; <pre ...><span
-     int startOfPre = pygmentsOutput.indexOf(">",pygmentsOutput.indexOf("<pre"))+1;
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Utilities/VisItBridge/databases/Velodyne/VelodyneReader.C ParaView-4.2.0_SRC.new/Utilities/VisItBridge/databases/Velodyne/VelodyneReader.C
---- ParaView-4.2.0_SRC/Utilities/VisItBridge/databases/Velodyne/VelodyneReader.C	2014-09-23 18:46:46.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Utilities/VisItBridge/databases/Velodyne/VelodyneReader.C	2014-12-19 15:39:41.000000000 +0300
-@@ -2,7 +2,7 @@
- // This code was contributed to the VisIt project by Corvid Technologies
- // on February 10, 2010.
- //
--
-+#define H5Eset_auto_vers 2
- #include <string.h>
- #include <cstdlib>
- 
-@@ -16,7 +16,6 @@
- #endif
- 
- #include <VelodyneReader.h>
--
- #include <visit-hdf5.h>
- 
- #include <set>
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Utilities/VisItBridge/databases/Vs/VsFilter.C ParaView-4.2.0_SRC.new/Utilities/VisItBridge/databases/Vs/VsFilter.C
---- ParaView-4.2.0_SRC/Utilities/VisItBridge/databases/Vs/VsFilter.C	2014-09-23 18:46:46.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Utilities/VisItBridge/databases/Vs/VsFilter.C	2014-12-19 15:39:41.000000000 +0300
-@@ -1,3 +1,7 @@
-+#define H5Gopen_vers 2
-+#define H5Dopen_vers 2
-+#define H5Eset_auto_vers 2
-+#define H5Aiterate_vers 2
- #include <vtk_hdf5.h>
- #include <visit-hdf5.h>
- #if HDF5_VERSION_GE(1,8,1)
-@@ -146,11 +150,7 @@
-       
-       // Get info of the linked object.
-       H5O_info_t objinfo;
--#ifndef H5_USE_16_API
-       hid_t obj_id = H5Oopen(locId, name, H5P_DEFAULT);
--#else
--      hid_t obj_id = H5Oopen(locId, name);        
--#endif
-       
-       if (obj_id < 0) {
-         VsLog::errorLog() <<"VsFilter::visitLinks() - unable to get id for external object " <<name <<std::endl;
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Utilities/VisItBridge/databases/Vs/VsH5File.C ParaView-4.2.0_SRC.new/Utilities/VisItBridge/databases/Vs/VsH5File.C
---- ParaView-4.2.0_SRC/Utilities/VisItBridge/databases/Vs/VsH5File.C	2014-09-23 18:46:46.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Utilities/VisItBridge/databases/Vs/VsH5File.C	2014-12-19 15:39:41.000000000 +0300
-@@ -4,7 +4,7 @@
-  *  Created on: Apr 27, 2010
-  *      Author: mdurant
-  */
--
-+#define H5Eset_auto_vers 2
- #include "VsH5File.h"
- #include "VsLog.h"
- #include "VsFilter.h"
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/CMake/vtkModuleTop.cmake ParaView-4.2.0_SRC.new/VTK/CMake/vtkModuleTop.cmake
---- ParaView-4.2.0_SRC/VTK/CMake/vtkModuleTop.cmake	2014-09-23 18:47:10.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/CMake/vtkModuleTop.cmake	2014-12-19 15:39:41.000000000 +0300
-@@ -476,6 +476,7 @@
-   get_property(VTK_TARGETS GLOBAL PROPERTY VTK_TARGETS)
-   if(VTK_TARGETS)
-     install(EXPORT ${VTK_INSTALL_EXPORT_NAME}  DESTINATION ${VTK_INSTALL_PACKAGE_DIR})
-+    install(EXPORT ${VTK_INSTALL_EXPORT_NAME}  DESTINATION ${VTK_INSTALL_PACKAGE_DIR} FILE VTKTargets.cmake)
-   else()
-     set(CMAKE_CONFIGURABLE_FILE_CONTENT "# No targets!")
-     configure_file(${CMAKE_ROOT}/Modules/CMakeConfigurableFile.in
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/Rendering/Matplotlib/vtkMatplotlibMathTextUtilities.cxx ParaView-4.2.0_SRC.new/VTK/Rendering/Matplotlib/vtkMatplotlibMathTextUtilities.cxx
---- ParaView-4.2.0_SRC/VTK/Rendering/Matplotlib/vtkMatplotlibMathTextUtilities.cxx	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/Rendering/Matplotlib/vtkMatplotlibMathTextUtilities.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -48,7 +48,7 @@
- //----------------------------------------------------------------------------
- vtkMatplotlibMathTextUtilities::Availablity
- vtkMatplotlibMathTextUtilities::MPLMathTextAvailable =
--vtkMatplotlibMathTextUtilities::NOT_TESTED;
-+vtkMatplotlibMathTextUtilities::UNAVAILABLE;
- 
- // A macro that is used in New() to print warnings if VTK_MATPLOTLIB_DEBUG
- // is defined in the environment. Use vtkGenericWarningMacro to allow this to
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/ThirdParty/verdict/vtkverdict/V_TetMetric.cpp ParaView-4.2.0_SRC.new/VTK/ThirdParty/verdict/vtkverdict/V_TetMetric.cpp
---- ParaView-4.2.0_SRC/VTK/ThirdParty/verdict/vtkverdict/V_TetMetric.cpp	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/ThirdParty/verdict/vtkverdict/V_TetMetric.cpp	2014-12-19 15:39:41.000000000 +0300
-@@ -373,7 +373,7 @@
-           coordinates[3][1] - coordinates[0][1],
-           coordinates[3][2] - coordinates[0][2] );
-   
--  double detTet = ab % ( ac * ad );
-+  double detTet = fabs( ab % ( ac * ad ) );
-   
-   if( detTet < VERDICT_DBL_MIN ) 
-     return (double)VERDICT_DBL_MAX;
-@@ -413,7 +413,7 @@
-   D = bd.length();
-   
-   double aspect_ratio;
--  aspect_ratio = normal_coeff * hm * ( A + B + C + D ) / fabs( detTet );
-+  aspect_ratio = normal_coeff * hm * ( A + B + C + D ) / detTet;
-   
-   if( aspect_ratio > 0 )
-     return (double) VERDICT_MIN( aspect_ratio, VERDICT_DBL_MAX );
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/Utilities/Python/vtkPython.h ParaView-4.2.0_SRC.new/VTK/Utilities/Python/vtkPython.h
---- ParaView-4.2.0_SRC/VTK/Utilities/Python/vtkPython.h	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/Utilities/Python/vtkPython.h	2014-12-19 15:39:41.000000000 +0300
-@@ -87,4 +87,14 @@
- #error "Python.h is different version from what VTK was configured with!!"
- #endif
- 
-+#ifdef VTK_NO_PYTHON_THREADS
-+#  define VTK_PY_GIL_ENSURE
-+#  define VTK_PY_GIL_RELEASE
-+#else
-+#  define VTK_PY_GIL_ENSURE  PyGILState_STATE _gstate_avoid_clash = PyGILState_Ensure();
-+#  define VTK_PY_GIL_RELEASE PyGILState_Release(_gstate_avoid_clash);
-+#
-+#endif
-+
-+
- #endif
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/Utilities/PythonInterpreter/vtkPythonInteractiveInterpreter.cxx ParaView-4.2.0_SRC.new/VTK/Utilities/PythonInterpreter/vtkPythonInteractiveInterpreter.cxx
---- ParaView-4.2.0_SRC/VTK/Utilities/PythonInterpreter/vtkPythonInteractiveInterpreter.cxx	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/Utilities/PythonInterpreter/vtkPythonInteractiveInterpreter.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -45,6 +45,7 @@
- 
-   void CleanupPythonObjects()
-     {
-+    VTK_PY_GIL_ENSURE
-     Py_XDECREF(this->InteractiveConsoleLocals);
-     Py_XDECREF(this->InteractiveConsole);
-     this->InteractiveConsole = NULL;
-@@ -54,6 +55,7 @@
-       const char* code = "import gc; gc.collect()\n";
-       vtkPythonInterpreter::RunSimpleString(code);
-       }
-+    VTK_PY_GIL_RELEASE
-     }
- 
-   PyObject* GetInteractiveConsole()
-@@ -65,6 +67,7 @@
- 
-     vtkPythonInterpreter::Initialize();
- 
-+    VTK_PY_GIL_ENSURE
-     // set up the code.InteractiveConsole instance that we'll use.
-     const char* code = "import code\n"
-       "__vtkConsoleLocals={'__name__':'__vtkconsole__','__doc__':None}\n"
-@@ -83,6 +86,7 @@
-       {
-       vtkGenericWarningMacro(
-         "Failed to locate the InteractiveConsole/InteractiveConsoleLocals object.");
-+      VTK_PY_GIL_RELEASE
-       return NULL;
-       }
-     Py_INCREF(this->InteractiveConsole);
-@@ -105,7 +109,7 @@
-       PySys_SetObject(const_cast<char*>("ps2"), ps2 = PyString_FromString("... "));
-       Py_XDECREF(ps2);
-       }
--
-+    VTK_PY_GIL_RELEASE
-     return this->InteractiveConsole;
-     }
- };
-@@ -167,6 +171,7 @@
-     i++;
-     }
- 
-+  VTK_PY_GIL_ENSURE
-   bool ret_value = false;
-   PyObject *res = PyObject_CallMethod(console,
-     const_cast<char*>("push"), const_cast<char*>("z"), buffer.c_str());
-@@ -179,6 +184,7 @@
-       }
-     Py_DECREF(res);
-     }
-+  VTK_PY_GIL_RELEASE
-   return ret_value;
- }
- 
-@@ -190,12 +196,14 @@
- 
-   this->Internals->GetInteractiveConsole(); //ensure the console is initialized
- 
-+  VTK_PY_GIL_ENSURE
-   PyObject* context = this->Internals->GetInteractiveConsoleLocalsPyObject();
-   PyObject* result = PyRun_String(const_cast<char*>(script), Py_file_input, context, context);
- 
-   if (result == NULL)
-     {
-     PyErr_Print();
-+    VTK_PY_GIL_RELEASE
-     return -1;
-     }
- 
-@@ -204,6 +212,7 @@
-     {
-     PyErr_Clear();
-     }
-+  VTK_PY_GIL_RELEASE
-   return 0;
- }
- 
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/Utilities/PythonInterpreter/vtkPythonInterpreter.cxx ParaView-4.2.0_SRC.new/VTK/Utilities/PythonInterpreter/vtkPythonInterpreter.cxx
---- ParaView-4.2.0_SRC/VTK/Utilities/PythonInterpreter/vtkPythonInterpreter.cxx	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/Utilities/PythonInterpreter/vtkPythonInterpreter.cxx	2014-12-19 15:39:54.000000000 +0300
-@@ -60,10 +60,12 @@
- 
-   inline void vtkPrependPythonPath(const char* pathtoadd)
-     {
-+    VTK_PY_GIL_ENSURE
-     PyObject* path = PySys_GetObject(const_cast<char*>("path"));
-     PyObject* newpath = PyString_FromString(pathtoadd);
-     PyList_Insert(path, 0, newpath);
-     Py_DECREF(newpath);
-+    VTK_PY_GIL_RELEASE
-     }
- }
- 
-@@ -107,7 +109,6 @@
- //----------------------------------------------------------------------------
- bool vtkPythonInterpreter::Initialize(int initsigs /*=0*/)
- {
--  vtkPythonInterpreter::InitializedOnce = true;
-   if (Py_IsInitialized() == 0)
-     {
- #if (VTK_PYTHON_MAJOR_VERSION > 2) ||\
-@@ -117,11 +118,26 @@
-     (void)initsigs;
-     Py_Initialize();
- #endif
--
- #ifdef SIGINT
-     // Put default SIGINT handler back after Py_Initialize/Py_InitializeEx.
-     signal(SIGINT, SIG_DFL);
- #endif
-+    }
-+
-+  if (! vtkPythonInterpreter::InitializedOnce)
-+    {
-+#ifndef VTK_NO_PYTHON_THREADS
-+    int threadInit = PyEval_ThreadsInitialized();
-+    PyEval_InitThreads(); // safe to call this multiple time
-+#endif
-+    // At this point we have GIL, or we are mono-thread.
-+    // Access to the static below is safe:
-+    vtkPythonInterpreter::InitializedOnce = true;
-+
-+#ifndef VTK_NO_PYTHON_THREADS
-+    if(!threadInit)
-+      PyEval_SaveThread(); // release GIL
-+#endif
-     // HACK: Calling PyRun_SimpleString for the first time for some reason results in
-     // a "\n" message being generated which is causing the error dialog to
-     // popup. So we flush that message out of the system before setting up the
-@@ -134,15 +150,17 @@
-     vtkPythonStdStreamCaptureHelper* wrapperErr =
-       NewPythonStdStreamCaptureHelper(true);
- 
--    // Redirect Python's stdout and stderr and stdin
--    PySys_SetObject(const_cast<char*>("stdout"),
-+    // Redirect Python's stdout and stderr and stdin - GIL protected operation
-+    VTK_PY_GIL_ENSURE
-+    int ret1 = PySys_SetObject(const_cast<char*>("stdout"),
-       reinterpret_cast<PyObject*>(wrapperOut));
--    PySys_SetObject(const_cast<char*>("stderr"),
-+    int ret2 = PySys_SetObject(const_cast<char*>("stderr"),
-       reinterpret_cast<PyObject*>(wrapperErr));
--    PySys_SetObject(const_cast<char*>("stdin"),
-+    int ret3 = PySys_SetObject(const_cast<char*>("stdin"),
-       reinterpret_cast<PyObject*>(wrapperOut));
-     Py_DECREF(wrapperOut);
-     Py_DECREF(wrapperErr);
-+    VTK_PY_GIL_RELEASE
- 
-     for (size_t cc=0; cc < PythonPaths.size(); cc++)
-       {
-@@ -162,6 +180,7 @@
-   if (Py_IsInitialized() != 0)
-     {
-     NotifyInterpreters(vtkCommand::ExitEvent);
-+    VTK_PY_GIL_ENSURE
-     Py_Finalize();
-     }
- }
-@@ -221,7 +240,9 @@
-     vtkPythonInterpreter::SetProgramName(argv[0]);
-     }
-   vtkPythonInterpreter::Initialize(1);
-+  VTK_PY_GIL_ENSURE
-   return Py_Main(argc, argv);
-+  // Py_Main already does a finalize etc ...
- }
- 
- //----------------------------------------------------------------------------
-@@ -235,7 +256,9 @@
-   buffer.erase(std::remove(buffer.begin(), buffer.end(), '\r'), buffer.end());
- 
-   // The cast is necessary because PyRun_SimpleString() hasn't always been const-correct
-+  VTK_PY_GIL_ENSURE
-   PyRun_SimpleString(const_cast<char*>(buffer.c_str()));
-+  VTK_PY_GIL_RELEASE
- }
- 
- //----------------------------------------------------------------------------
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/Wrapping/PythonCore/vtkPythonCommand.cxx ParaView-4.2.0_SRC.new/VTK/Wrapping/PythonCore/vtkPythonCommand.cxx
---- ParaView-4.2.0_SRC/VTK/Wrapping/PythonCore/vtkPythonCommand.cxx	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/Wrapping/PythonCore/vtkPythonCommand.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -30,14 +30,18 @@
-   vtkPythonUtil::UnRegisterPythonCommand(this);
-   if (this->obj && Py_IsInitialized())
-     {
-+    VTK_PY_GIL_ENSURE
-     Py_DECREF(this->obj);
-+    VTK_PY_GIL_RELEASE
-     }
-   this->obj = NULL;
- }
- 
- void vtkPythonCommand::SetObject(PyObject *o)
- {
-+  VTK_PY_GIL_ENSURE
-   Py_INCREF(o);
-+  VTK_PY_GIL_RELEASE
-   this->obj = o;
- }
- 
-@@ -92,11 +96,11 @@
-   // If a threadstate has been set using vtkPythonCommand::SetThreadState,
-   // then swap it in here.  See the email to vtk-developers@vtk.org from
-   // June 18, 2009 with subject "Py_NewInterpreter and vtkPythonCallback issue"
--  PyThreadState* prevThreadState = NULL;
--  if (this->ThreadState)
--    {
--    prevThreadState = PyThreadState_Swap(this->ThreadState);
--    }
-+//  PyThreadState* prevThreadState = NULL;
-+//  if (this->ThreadState)
-+//    {
-+//    prevThreadState = PyThreadState_Swap(this->ThreadState);
-+//    }
- 
-   PyObject * obj2 = NULL;
-   if (ptr && ptr->GetReferenceCount() > 0)
-@@ -237,10 +241,10 @@
-     }
- 
-   // If we did the swap near the top of this function then swap back now.
--  if (this->ThreadState)
--    {
--    PyThreadState_Swap(prevThreadState);
--    }
-+//  if (this->ThreadState)
-+//    {
-+//    PyThreadState_Swap(prevThreadState);
-+//    }
- 
- #ifndef VTK_NO_PYTHON_THREADS
- #if (PY_MAJOR_VERSION > 2) || \
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/VTK/Wrapping/PythonCore/vtkSmartPyObject.cxx ParaView-4.2.0_SRC.new/VTK/Wrapping/PythonCore/vtkSmartPyObject.cxx
---- ParaView-4.2.0_SRC/VTK/Wrapping/PythonCore/vtkSmartPyObject.cxx	2014-09-23 18:47:11.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/VTK/Wrapping/PythonCore/vtkSmartPyObject.cxx	2014-12-19 15:39:41.000000000 +0300
-@@ -30,37 +30,52 @@
- vtkSmartPyObject::vtkSmartPyObject(const vtkSmartPyObject &other) :
-   Object(other.Object)
- {
-+  VTK_PY_GIL_ENSURE
-   Py_XINCREF(this->Object);
-+  VTK_PY_GIL_RELEASE
- }
- 
- //--------------------------------------------------------------------
- vtkSmartPyObject::~vtkSmartPyObject()
- {
--  Py_XDECREF(this->Object);
-+  if (Py_IsInitialized())
-+    {
-+    VTK_PY_GIL_ENSURE
-+    Py_XDECREF(this->Object);
-+    VTK_PY_GIL_RELEASE
-+    }
-+  else
-+    Py_XDECREF(this->Object);
- }
- 
- //--------------------------------------------------------------------
- vtkSmartPyObject &vtkSmartPyObject::operator=(const vtkSmartPyObject &other)
- {
-+  VTK_PY_GIL_ENSURE
-   Py_XDECREF(this->Object);
-   this->Object = other.Object;
-   Py_XINCREF(this->Object);
-+  VTK_PY_GIL_RELEASE
-   return *this;
- }
- 
- //--------------------------------------------------------------------
- vtkSmartPyObject &vtkSmartPyObject::operator=(PyObject *obj)
- {
-+  VTK_PY_GIL_ENSURE
-   Py_XDECREF(this->Object);
-   this->Object = obj;
-   Py_XINCREF(this->Object);
-+  VTK_PY_GIL_RELEASE
-   return *this;
- }
- 
- //--------------------------------------------------------------------
- void vtkSmartPyObject::TakeReference(PyObject *obj)
- {
-+  VTK_PY_GIL_ENSURE
-   Py_XDECREF(this->Object);
-+  VTK_PY_GIL_RELEASE
-   this->Object = obj;
- }
- 
-@@ -99,6 +114,8 @@
- //--------------------------------------------------------------------
- PyObject *vtkSmartPyObject::GetAndIncreaseReferenceCount()
- {
-+  VTK_PY_GIL_ENSURE
-   Py_XINCREF(this->Object);
-+  VTK_PY_GIL_RELEASE
-   return this->Object;
- }
-diff -Naur --exclude=CVS --exclude=.git ParaView-4.2.0_SRC/Wrapping/Python/paraview/servermanager.py ParaView-4.2.0_SRC.new/Wrapping/Python/paraview/servermanager.py
---- ParaView-4.2.0_SRC/Wrapping/Python/paraview/servermanager.py	2014-09-23 18:46:44.000000000 +0400
-+++ ParaView-4.2.0_SRC.new/Wrapping/Python/paraview/servermanager.py	2014-12-19 15:39:41.000000000 +0300
-@@ -1092,7 +1092,7 @@
-         property = self.SMProperty
-         nElems = property.GetNumberOfElements()
-         if nElems%2 != 0:
--            raise ValueError, "The SMProperty with XML label '%s' has a size that is not a multiple of 2." % property.GetXMLLabel()
-+            nElems -= 1
-         self.__arrays = []
-         for i in range(0, nElems, 2):
-             if self.GetElement(i+1) != '0':
diff --git a/ffmpeg-3.patch b/ffmpeg3.patch
index 2ffdc6d013b6..b5a2cb940141 100644
--- a/ffmpeg-3.patch
+++ b/ffmpeg3.patch
@@ -1,7 +1,7 @@
-diff -Naur ParaView-v4.2.0-source.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx ParaView-v4.2.0-source/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx
---- ParaView-v4.2.0-source.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx	2016-05-13 11:21:34.322631568 +0200
-+++ ParaView-v4.2.0-source/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx	2016-05-13 15:45:28.098994000 +0200
-@@ -189,11 +189,11 @@
+diff -Naur ParaView-5.0.1p1.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx ParaView-5.0.1p1/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx
+--- ParaView-5.0.1p1.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx	2016-11-19 23:17:56.596094663 +0100
++++ ParaView-5.0.1p1/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx	2016-11-19 23:18:17.099178065 +0100
+@@ -191,11 +191,11 @@
    c->height = this->Dim[1];
    if (this->Writer->GetCompression())
      {
@@ -15,7 +15,7 @@ diff -Naur ParaView-v4.2.0-source.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx ParaVie
      }
  
    //to do playback at actual recorded rate, this will need more work see also below
-@@ -272,13 +272,13 @@
+@@ -274,13 +274,13 @@
  #endif
  
    //for the output of the writer's input...
@@ -28,10 +28,10 @@ diff -Naur ParaView-v4.2.0-source.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx ParaVie
      }
 -  int RGBsize = avpicture_get_size(PIX_FMT_RGB24, c->width, c->height);
 +  int RGBsize = avpicture_get_size(AV_PIX_FMT_RGB24, c->width, c->height);
-   unsigned char *rgb = new unsigned char[RGBsize];
+   unsigned char *rgb = (unsigned char *)av_malloc(sizeof(unsigned char) * RGBsize);
    if (!rgb)
      {
-@@ -286,10 +286,10 @@
+@@ -288,10 +288,10 @@
      return 0;
      }
    //The rgb buffer should get deleted when this->rgbInput is.
@@ -44,7 +44,7 @@ diff -Naur ParaView-v4.2.0-source.orig/VTK/IO/FFMPEG/vtkFFMPEGWriter.cxx ParaVie
    if (!this->yuvOutput)
      {
      vtkGenericWarningMacro (<< "Could not make yuvOutput avframe." );
-@@ -347,12 +347,12 @@
+@@ -349,12 +349,12 @@
    //convert that to YUV for input to the codec
  #ifdef VTK_FFMPEG_HAS_IMG_CONVERT
    img_convert((AVPicture *)this->yuvOutput, cc->pix_fmt,
diff --git a/gcc49.patch b/gcc49.patch
deleted file mode 100644
index 2ed74f0282c9..000000000000
--- a/gcc49.patch
+++ /dev/null
@@ -1,122 +0,0 @@
---- a/VTK/Filters/ParallelMPI/vtkDistributedDataFilter.cxx	2014-09-23 16:47:10.000000000 +0200
-+++ b/VTK/Filters/ParallelMPI/vtkDistributedDataFilter.cxx	2014-12-22 10:31:13.575228267 +0100
-@@ -1091,7 +1091,10 @@
-   vtkIdType cellsPerNode = numTotalCells / nprocs;
- 
-   vtkIdList **sendCells = new vtkIdList * [ nprocs ];
--  memset(sendCells, 0, sizeof(vtkIdList *) * nprocs);
-+  
-+  if (sizeof(vtkIdList *) * nprocs > 0) {
-+    memset(sendCells, 0, sizeof(vtkIdList *) * nprocs);
-+  }
- 
-   if (numConsumers == nprocs - 1)
-     {
-@@ -1582,7 +1585,9 @@
-   // Exchange int arrays
- 
-   float **recvArrays = new float * [nprocs];
--  memset(recvArrays, 0, sizeof(float *) * nprocs);
-+  if (sizeof(float *) * nprocs > 0) {
-+    memset(recvArrays, 0, sizeof(float *) * nprocs);
-+  }
- 
-   if (sendSize[me] > 0)  // sent myself an array
-     {
-@@ -1703,7 +1708,9 @@
-   // Exchange int arrays
- 
-   vtkIdType **recvArrays = new vtkIdType * [nprocs];
--  memset(recvArrays, 0, sizeof(vtkIdType *) * nprocs);
-+  if (sizeof(vtkIdType *) * nprocs > 0) {
-+    memset(recvArrays, 0, sizeof(vtkIdType *) * nprocs);
-+  }
- 
-   if (sendSize[me] > 0)  // sent myself an array
-     {
-@@ -2807,7 +2814,9 @@
- 
-   unsigned char *vals = new unsigned char [npoints];
- 
--  memset(vals, val, npoints);
-+  if (npoints > 0) {
-+    memset(vals, val, npoints);
-+  }
- 
-   vtkUnsignedCharArray *Array = vtkUnsignedCharArray::New();
-   Array->SetName(arrayName);
-@@ -2827,7 +2836,9 @@
- 
-   unsigned char *vals = new unsigned char [ncells];
- 
--  memset(vals, val, ncells);
-+  if (ncells > 0) {
-+    memset(vals, val, ncells);
-+  }
- 
-   vtkUnsignedCharArray *Array = vtkUnsignedCharArray::New();
-   Array->SetName(arrayName);
-@@ -3026,7 +3037,9 @@
-   vtkIdType nGridPoints = grid->GetNumberOfPoints();
- 
-   vtkIdType *numPointsOutside = new vtkIdType [nprocs];
--  memset(numPointsOutside, 0, sizeof(vtkIdType) * nprocs);
-+  if (sizeof(vtkIdType) * nprocs > 0) {
-+    memset(numPointsOutside, 0, sizeof(vtkIdType) * nprocs);
-+  }
- 
-   vtkIdTypeArray *globalIds = vtkIdTypeArray::New();
-   globalIds->SetNumberOfValues(nGridPoints);
-@@ -3108,10 +3121,16 @@
-   // global ID back?
- 
-   vtkFloatArray **ptarrayOut = new vtkFloatArray * [nprocs];
--  memset(ptarrayOut, 0, sizeof(vtkFloatArray *) * nprocs);
-+  
-+  if (sizeof(vtkFloatArray *) * nprocs > 0) {
-+    memset(ptarrayOut, 0, sizeof(vtkFloatArray *) * nprocs);
-+  }
- 
-   vtkIdTypeArray **localIds     = new vtkIdTypeArray * [nprocs];
--  memset(localIds, 0, sizeof(vtkIdTypeArray *) * nprocs);
-+  
-+  if (sizeof(vtkIdTypeArray *) * nprocs > 0) {
-+    memset(localIds, 0, sizeof(vtkIdTypeArray *) * nprocs);
-+  }
- 
-   vtkIdType *next = new vtkIdType [nprocs];
-   vtkIdType *next3 = new vtkIdType [nprocs];
-@@ -3286,7 +3305,9 @@
-     {
-     // There are no cells in my assigned region
- 
--    memset(gids, 0, sizeof(vtkIdTypeArray *) * nprocs);
-+    if (sizeof(vtkIdTypeArray *) * nprocs > 0) {
-+      memset(gids, 0, sizeof(vtkIdTypeArray *) * nprocs);
-+    }
- 
-     return gids;
-     }
-@@ -3491,7 +3512,10 @@
-   std::multimap<int, int>::iterator mapIt;
- 
-   vtkIdTypeArray **processList = new vtkIdTypeArray * [nprocs];
--  memset(processList, 0, sizeof (vtkIdTypeArray *) * nprocs);
-+
-+  if (sizeof (vtkIdTypeArray *) * nprocs > 0) {
-+    memset(processList, 0, sizeof (vtkIdTypeArray *) * nprocs);
-+  }
- 
-   for (int i=0; i<nprocs; i++)
-     {
-@@ -3581,7 +3605,9 @@
-   vtkIdType numPoints = grid->GetNumberOfPoints();
- 
-   vtkIdTypeArray **ghostPtIds = new vtkIdTypeArray * [nprocs];
--  memset(ghostPtIds, 0, sizeof(vtkIdTypeArray *) * nprocs);
-+  if (sizeof(vtkIdTypeArray *) * nprocs) {
-+    memset(ghostPtIds, 0, sizeof(vtkIdTypeArray *) * nprocs);
-+  }
- 
-   if (numPoints < 1)
-     {
diff --git a/gcc6.patch b/gcc6.patch
deleted file mode 100644
index 4a686fda930a..000000000000
--- a/gcc6.patch
+++ /dev/null
@@ -1,19 +0,0 @@
-diff -Naur ParaView-v4.2.0-source.orig/Plugins/PointSprite/Qvis/VolumeAttributes.cpp ParaView-v4.2.0-source/Plugins/PointSprite/Qvis/VolumeAttributes.cpp
---- ParaView-v4.2.0-source.orig/Plugins/PointSprite/Qvis/VolumeAttributes.cpp	2016-05-13 11:21:34.149298238 +0200
-+++ ParaView-v4.2.0-source/Plugins/PointSprite/Qvis/VolumeAttributes.cpp	2016-05-13 19:24:03.332076000 +0200
-@@ -39,6 +39,7 @@
- #include <DataNode.h>
- #include <ColorControlPoint.h>
- #include <GaussianControlPoint.h>
-+#include <cmath>
- 
- namespace pointsprite {
- //
-@@ -1825,7 +1826,6 @@
- //    Made the method const.
- //
- // ****************************************************************************
--#include <math.h>
- void
- VolumeAttributes::GetGaussianOpacities(unsigned char *alphas) const
- {
diff --git a/surface_lic.png b/surface_lic.png
deleted file mode 100644
index 7306667e27b6..000000000000
--- a/surface_lic.png
+++ /dev/null
diff --git a/uint.patch b/uint.patch
deleted file mode 100644
index 2a66eea6e4f9..000000000000
--- a/uint.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-09-23 16:47:11.000000000 +0200
-+++ b/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-22 11:04:14.003492645 +0100
-@@ -1183,7 +1183,7 @@
-     if (bitmap)
-       {
-       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
--      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
-+      metaData.descent = std::min(-int((bitmap->rows - (bitmapGlyph->top - 1))),
-                                   metaData.descent);
-       }
-     ++heightString;
-@@ -1950,8 +1950,8 @@
-     if (bitmap)
-       {
-       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
--      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
--      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
-+      bbox[1] = std::max(bbox[1], int(pen[0] + bitmapGlyph->left + bitmap->width));
-+      bbox[2] = std::min(bbox[2], int(pen[1] + bitmapGlyph->top - 1 - bitmap->rows));
-       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
-       }
-     else