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authorViktor Drobot2019-11-20 14:26:19 +0300
committerViktor Drobot2019-11-20 14:26:19 +0300
commit277f49132cbfe44b75e487813eb79bcd7686e223 (patch)
tree9c3995d121204a1f130e2e49acd96ee154567a0d
parent201c570b879eaa13a56153b0118a841ce05d16a5 (diff)
downloadaur-277f49132cbfe44b75e487813eb79bcd7686e223.tar.gz
Update for GCC 8
-rw-r--r--.SRCINFO8
-rw-r--r--PKGBUILD10
-rw-r--r--pmemd2
-rw-r--r--pmemd.MPI2
4 files changed, 11 insertions, 11 deletions
diff --git a/.SRCINFO b/.SRCINFO
index fa147b392a20..3d04b3eed0a0 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -6,16 +6,16 @@ pkgbase = pmemd
arch = x86_64
license = custom
makedepends = make
- makedepends = gcc7
- makedepends = gcc7-fortran
+ makedepends = gcc8
+ makedepends = gcc8-fortran
makedepends = tcsh
makedepends = imake
makedepends = patch
- depends = openmpi3-gcc7
+ depends = openmpi3-gcc8
depends = fakeroot
depends = zlib
depends = bzip2
- depends = gcc7-libs
+ depends = gcc8-libs
depends = flex
depends = python2
optdepends = plumed-patches: PLUMED support
diff --git a/PKGBUILD b/PKGBUILD
index 375f86b430e8..898302329ac4 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,14 +3,14 @@
pkgname=pmemd
pkgver=18
_toolsver=19
-_gccver=7.4.1
+_gccver=8.3.0
pkgrel=1
pkgdesc="PMEMD module of AMBER software package"
url="http://ambermd.org/"
license=('custom')
arch=('x86_64')
-depends=('openmpi3-gcc7' 'fakeroot' 'zlib' 'bzip2' 'gcc7-libs' 'flex' 'python2')
-makedepends=('make' 'gcc7' 'gcc7-fortran' 'tcsh' 'imake' 'patch')
+depends=('openmpi3-gcc8' 'fakeroot' 'zlib' 'bzip2' 'gcc8-libs' 'flex' 'python2')
+makedepends=('make' 'gcc8' 'gcc8-fortran' 'tcsh' 'imake' 'patch')
optdepends=('plumed-patches: PLUMED support'
'plumed: metadynamics support'
'plumed-mpi: metadynamics support with MPI')
@@ -50,7 +50,7 @@ build() {
# build serial version
cd ${srcdir}/amber${pkgver}
- LANG=en_US.UTF-8 CC=gcc-7 CXX=g++-7 FC=gfortran-7 ./configure --with-python /usr/bin/python2 --no-updates gnu
+ LANG=en_US.UTF-8 CC=gcc-8 CXX=g++-8 FC=gfortran-8 ./configure --with-python /usr/bin/python2 --no-updates gnu
# add support for PLUMED
if [ -e "/usr/bin/plumed-mpi-patch" -a -e "/usr/lib/plumed-mpi/patches/amber${pkgver}.diff" ]; then
@@ -80,7 +80,7 @@ build() {
# build parallel version
cd ${srcdir}/amber${pkgver}
- LANG=en_US.UTF-8 CC=gcc-7 CXX=g++-7 FC=gfortran-7 ./configure --with-python /usr/bin/python2 --no-updates -mpi gnu
+ LANG=en_US.UTF-8 CC=gcc-8 CXX=g++-8 FC=gfortran-8 ./configure --with-python /usr/bin/python2 --no-updates -mpi gnu
cd ${srcdir}/amber${pkgver}/src
make install
}
diff --git a/pmemd b/pmemd
index 752fe936a652..67d7c548a6de 100644
--- a/pmemd
+++ b/pmemd
@@ -1,6 +1,6 @@
#!/usr/bin/bash
-export _gccver=7.4.1
+export _gccver=8.3.0
export LD_LIBRARY_PATH="/usr/lib/gcc/x86_64-pc-linux-gnu/${_gccver}:$LD_LIBRARY_PATH"
/usr/lib/pmemd/bin/pmemd "$@"
diff --git a/pmemd.MPI b/pmemd.MPI
index 90e7e7e78aca..f1ed57611439 100644
--- a/pmemd.MPI
+++ b/pmemd.MPI
@@ -1,6 +1,6 @@
#!/usr/bin/bash
-export _gccver=7.4.1
+export _gccver=8.3.0
export LD_LIBRARY_PATH="/usr/lib/gcc/x86_64-pc-linux-gnu/${_gccver}:$LD_LIBRARY_PATH"
/usr/lib/pmemd/bin/pmemd.MPI "$@"