Initial import

2 files changed, 61 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..45bd0e178ae2
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,13 @@
+pkgbase = python-fastaq-git
+	pkgdesc = Manipulate FASTA and FASTQ files.
+	pkgver = v1.7.0.r0.g360153c
+	pkgrel = 2
+	url = https://github.com/sanger-pathogens/Fastaq
+	arch = any
+	license = GPL
+	makedepends = git
+	depends = python
+	provides = python-fastaq
+
+pkgname = python-fastaq-git
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..d0cca9a9bde6
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,48 @@
+# Maintainer: Fabio Zanini <fabio.zanini@tuebingen.mpg.de>
+pkgname=python-fastaq-git
+pkgver=v1.7.0.r0.g360153c
+pkgrel=2
+pkgdesc="Manipulate FASTA and FASTQ files."
+arch=('any')
+url="https://github.com/sanger-pathogens/Fastaq"
+license=('GPL')
+depends=('python')
+makedepends=('git')
+provides=('python-fastaq')
+source=()
+md5sums=() #generate with 'makepkg -g'
+
+_gitroot="https://github.com/sanger-pathogens/Fastaq.git"
+_gitname="Fastaq"
+
+pkgver() {
+  cd "$srcdir/$_gitname"
+  git describe --tags --long | sed -r 's/([^-]*-g)/r\1/;s/-/./g'
+}
+
+build() {
+  cd "$srcdir"
+  msg "Connecting to GIT server...."
+
+  if [[ -d "$_gitname" ]]; then
+    cd "$_gitname" && git pull origin
+    msg "The local files are updated."
+  else
+    git clone "$_gitroot" "$_gitname"
+  fi
+
+  msg "GIT checkout done or server timeout"
+  msg "Starting build..."
+
+  rm -rf "$srcdir/$_gitname-build"
+  git clone "$srcdir/$_gitname" "$srcdir/$_gitname-build"
+  cd "$srcdir/$_gitname-build"
+
+}
+
+package() {
+  cd "$srcdir/$_gitname-build"
+  python setup.py install --root="$pkgdir/" --optimize=1
+}
+
+# vim:set ts=2 sw=2 et: