Drop python2 support

3 files changed, 32 insertions, 52 deletions

diff --git a/.SRCINFO b/.SRCINFO
index f291ca242b14..084aab709e35 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,21 +1,14 @@
 pkgbase = python-geneimpacts
-	pkgdesc = Compare and normalize effects from variant annotation tools (snpEff, VEP)
-	pkgver = 0.3.4
+	pkgdesc = normalize effects from variant annotation tools (snpEff, VEP)
+	pkgver = 0.3.7
 	pkgrel = 1
-	url = https://pypi.python.org/pypi/geneimpacts
+	url = https://pypi.org/project/geneimpacts
 	arch = any
 	license = MIT
-	makedepends = python
+	checkdepends = python-nose
 	makedepends = python-setuptools
-	makedepends = python2
-	makedepends = python2-setuptools
-	options = !emptydirs
-	source = python-geneimpacts-0.3.4.tar.gz::https://pypi.python.org/packages/c9/0d/cdb5d3c45a65f33563d98838e89a6e37dad091cd10842a5c9f472503a8a3/geneimpacts-0.3.4.tar.gz
-	sha256sums = bdd841977135ea81a75f2a58d7b9bce1a13682ca0c09eab18de42309257d893f
-
-pkgname = python-geneimpacts
 	depends = python
+	source = https://pypi.org/packages/source/g/geneimpacts/geneimpacts-0.3.7.tar.gz
+	sha512sums = 317f6f2122416266144d13d9e9a3623da9f15a6df85f2d329f2200389f9acfbc455ef2b9adf0ff335e3ca578ac013d8c9e49690f5e42466bea7641436dd5e0e4
 
-pkgname = python2-geneimpacts
-	depends = python2
-
+pkgname = python-geneimpacts
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 000000000000..f59ec20aabf5
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+*
\ No newline at end of file
diff --git a/PKGBUILD b/PKGBUILD
index 18eb76af2e1e..adbb152ef0b9 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,45 +1,31 @@
-# Maintainer: Clint Valentine <valentine.clint@gmail.com>
-
-_name=geneimpacts
-pkgbase='python-geneimpacts'
-pkgname=('python-geneimpacts' 'python2-geneimpacts')
-pkgver=0.3.4
+# Contributor: Clint Valentine <valentine.clint@gmail.com>
+_base=geneimpacts
+pkgname=python-${_base}
+pkgver=0.3.7
 pkgrel=1
-pkgdesc="Compare and normalize effects from variant annotation tools (snpEff, VEP)"
-arch=('any')
-url="https://pypi.python.org/pypi/geneimpacts"
-license=('MIT')
-makedepends=(
-  'python' 'python-setuptools'
-  'python2' 'python2-setuptools')
-options=(!emptydirs)
-source=("${pkgname}"-"${pkgver}".tar.gz::https://pypi.python.org/packages/c9/0d/cdb5d3c45a65f33563d98838e89a6e37dad091cd10842a5c9f472503a8a3/geneimpacts-0.3.4.tar.gz)
-sha256sums=('bdd841977135ea81a75f2a58d7b9bce1a13682ca0c09eab18de42309257d893f')
-
-prepare() {
-  cp -a "${_name}"-"${pkgver}"{,-py2}
-}
-
-build(){
-  cd "${srcdir}"/"${_name}"-"${pkgver}"
+pkgdesc="normalize effects from variant annotation tools (snpEff, VEP)"
+arch=(any)
+url="https://pypi.org/project/${_base}"
+license=(MIT)
+depends=(python)
+makedepends=(python-setuptools)
+checkdepends=(python-nose)
+source=(https://pypi.org/packages/source/${_base::1}/${_base}/${_base}-${pkgver}.tar.gz)
+sha512sums=('317f6f2122416266144d13d9e9a3623da9f15a6df85f2d329f2200389f9acfbc455ef2b9adf0ff335e3ca578ac013d8c9e49690f5e42466bea7641436dd5e0e4')
+
+build() {
+  cd ${_base}-${pkgver}
+  export PYTHONHASHSEED=0
   python setup.py build
-
-  cd "${srcdir}"/"${_name}"-"${pkgver}"-py2
-  python2 setup.py build
 }
 
-package_python2-geneimpacts() {
-  depends=('python2')
-
-  cd "${_name}"-"${pkgver}"-py2
-  python2 setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build
-  install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE
+check() {
+  cd ${_base}-${pkgver}
+  python -m nose
 }
 
-package_python-geneimpacts() {
-  depends=('python')
-
-  cd "${_name}"-"${pkgver}"
-  python setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build
-  install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE
+package() {
+  cd ${_base}-${pkgver}
+  PYTHONPYCACHEPREFIX="${PWD}/.cache/cpython/" python setup.py install --prefix=/usr --root="${pkgdir}" --optimize=1 --skip-build
+  install -Dm 644 LICENSE -t "${pkgdir}/usr/share/licenses/${pkgname}"
 }