diff options
| author | Martin Larralde | 2024-09-02 23:07:24 +0200 |
|---|---|---|
| committer | Martin Larralde | 2024-09-02 23:11:37 +0200 |
| commit | 5786479b8899ad9e23ea27c453e009036107199b (patch) | |
| tree | 38ca31f7fbd598681fe72b08c342fe38275c3047 | |
| download | aur-5786479b8899ad9e23ea27c453e009036107199b.tar.gz | |
Release v0.9.0
| -rw-r--r-- | .SRCINFO | 16 | ||||
| -rwxr-xr-x | PKGBUILD | 42 |
2 files changed, 58 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..d400bfb02293 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,16 @@ +pkgbase = python-lightmotif + pkgdesc = PyO3 bindings and Python interface to lightmotif, a library for platform-accelerated biological motif scanning using position weight matrices. + pkgver = 0.9.0 + pkgrel = 1 + url = https://github.com/althonos/lightmotif + arch = any + license = MIT OR GPL-3.0-or-later + makedepends = python-setuptools + makedepends = python-build + makedepends = python-installer + makedepends = cargo + depends = python + source = https://files.pythonhosted.org/packages/source/l/lightmotif/lightmotif-0.9.0.post2.tar.gz + sha256sums = SKIP + +pkgname = python-lightmotif diff --git a/PKGBUILD b/PKGBUILD new file mode 100755 index 000000000000..774334164ae3 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,42 @@ +# Maintainer: Martin Larralde <martin.larralde@embl.de> + +_name=lightmotif +pkgname=python-${_name} +pkgver=0.9.0 +_version=0.9.0.post2 +pkgrel=1 +pkgdesc="PyO3 bindings and Python interface to lightmotif, a library for platform-accelerated biological motif scanning using position weight matrices." +url="https://github.com/althonos/lightmotif" +arch=('any') +license=("MIT OR GPL-3.0-or-later") +groups=() +makedepends=('python-setuptools' 'python-build' 'python-installer' 'cargo') +depends=('python') +source=("https://files.pythonhosted.org/packages/source/${_name::1}/${_name}/${_name}-${_version}.tar.gz") +noextract=() +sha256sums=('b1702c99b0fdf43df574dedc5a10894d531d7998ec5f914f844181bff2cd4615') + +prepare() { + cargo fetch --manifest-path "${srcdir}/${_name}-${_version}/lightmotif-py/Cargo.toml" --target "$CARCH-unknown-linux-gnu" +} + +build() { + export RUSTUP_TOOLCHAIN=stable + cd "${srcdir}/${_name}-${_version}" + python -m build --wheel --no-isolation +} + +check() { + local pyver=$(python -c 'import sys; print("{}{}".format(*sys.version_info[:2]))') + local impl=$(python -c 'import platform; print(platform.python_implementation().lower())') + local machine=$(python -c 'import platform; print(platform.machine())') + cd "${srcdir}/${_name}-${_version}/build/lib.linux-${machine}-${impl}-${pyver}" + python -m unittest ${_name}.tests +} + +package() { + local abitag=$(python -c 'import sys; print(*sys.version_info[:2], sep="")') + local machine=$(python -c 'import platform; print(platform.machine())') + python -m installer --destdir="$pkgdir" "${srcdir}/${_name}-${_version}/dist/${_name}-${_version}-cp${abitag}-cp${abitag}-linux_${machine}.whl" + install -Dm644 ${srcdir}/${_name}-${_version}/COPYING "$pkgdir/usr/share/licenses/$pkgname/COPYING" +} |