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authorGrey Christoforo2019-02-09 15:41:08 +0000
committerGrey Christoforo2019-02-09 15:41:08 +0000
commit08140f967ae1f3ddd7939b5192bf8e77f614b6fd (patch)
tree5f53fdf5c2e2e3591b76bf342650ebb9bfab8378
downloadaur-08140f967ae1f3ddd7939b5192bf8e77f614b6fd.tar.gz
initial commit
-rw-r--r--.SRCINFO32
-rw-r--r--.gitignore4
-rw-r--r--PKGBUILD27
3 files changed, 63 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 00000000000..1af0231a42b
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,32 @@
+pkgbase = python-q2-dada2
+ pkgdesc = QIIME 2 plugin wrapping DADA2
+ pkgver = 2019.1.0
+ pkgrel = 1
+ url = https://qiime2.org
+ arch = any
+ license = BSD 3-Clause License
+ makedepends = python-setuptools
+ depends = python-qiime2
+ depends = python-biom-format
+ depends = r-biobase
+ depends = r-biocgenerics
+ depends = r-biocparallel
+ depends = r-biostrings
+ depends = r-dada2
+ depends = r-delayedarray
+ depends = r-genomeinfodb
+ depends = r-genomeinfodbdata
+ depends = r-genomicalignments
+ depends = r-genomicranges
+ depends = r-iranges
+ depends = r-rsamtools
+ depends = r-s4vectors
+ depends = r-shortread
+ depends = r-summarizedexperiment
+ depends = r-xvector
+ depends = r-zlibbioc
+ source = https://github.com/qiime2/q2-dada2/archive/2019.1.0.tar.gz
+ sha256sums = 2cebca1380ea03be53c3a485ed2fb95168cbea115c3dc851c7a02b5ad59a63ac
+
+pkgname = python-q2-dada2
+
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 00000000000..574a8578368
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,4 @@
+/src
+/pkg
+*.tar.gz
+*.tar.xz
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 00000000000..839913716ef
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,27 @@
+# Maintainer: Grey Christoforo <first name [at] last name [dot] net>
+
+pkgname=python-q2-dada2
+_pkgname=q2-dada2
+pkgver=2019.1.0
+pkgrel=1
+pkgdesc="QIIME 2 plugin wrapping DADA2"
+arch=('any')
+url="https://qiime2.org"
+license=('BSD 3-Clause License')
+depends=('python-qiime2' 'python-biom-format' 'r-biobase' 'r-biocgenerics' 'r-biocparallel' 'r-biostrings' 'r-dada2' 'r-delayedarray' 'r-genomeinfodb' 'r-genomeinfodbdata' 'r-genomicalignments' 'r-genomicranges' 'r-iranges' 'r-rsamtools' 'r-s4vectors' 'r-shortread' 'r-summarizedexperiment' 'r-xvector' 'r-zlibbioc')
+makedepends=('python-setuptools')
+source=("https://github.com/qiime2/${_pkgname}/archive/${pkgver}.tar.gz")
+sha256sums=('2cebca1380ea03be53c3a485ed2fb95168cbea115c3dc851c7a02b5ad59a63ac')
+
+build() {
+ cd "$srcdir/$_pkgname-$pkgver"
+ python setup.py build
+}
+
+
+package(){
+ cd "$srcdir/$_pkgname-$pkgver"
+ python setup.py install --root="$pkgdir/" --optimize=1
+}
+
+# vim:ts=2:sw=2:et: