4.3.1

3 files changed, 33 insertions, 13 deletions

diff --git a/.SRCINFO b/.SRCINFO
index 0d5d2a215eb1..ed4a58e4310a 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,22 +1,23 @@
 pkgbase = python2-pyteomics
 	pkgdesc = A framework for proteomics data analysis.
-	pkgver = 4.2
+	pkgver = 4.3.1
 	pkgrel = 1
 	url = https://pyteomics.readthedocs.io
 	changelog = CHANGELOG
 	arch = any
 	license = Apache
 	depends = python2
-	depends = python2-setuptools
+	depends = python2-pip
 	optdepends = python2-matplotlib: for pylab_aux module
 	optdepends = python2-sqlalchemy: for mass.unimod module
 	optdepends = python2-pandas: for convenient filtering of CSV tables from search engines
 	optdepends = python2-lxml: for XML parsing modules
 	optdepends = python2-numpy: for most of features, highly recommended
 	optdepends = python2-dill: needed for multiprocessing when pickle is not enough
+	optdepends = python2-pynumpress: for Numpress support
 	options = !emptydirs
-	source = https://pypi.io/packages/source/p/pyteomics/pyteomics-4.2.tar.gz
-	sha256sums = e4762659520b518df0d75e9fc2a1a011315fd0835ec501ae81583275d340ef1d
+	source = https://pypi.debian.net/pyteomics/pyteomics-4.3.1-py2.py3-none-any.whl
+	sha256sums = be9367c5b9a828c11c7df943d5bed8ee24b5d2d5b63676fcddd789ea5ad98b73
 
 pkgname = python2-pyteomics
 
diff --git a/CHANGELOG b/CHANGELOG
index 0322f6168600..7edfec758cd5 100644
--- a/CHANGELOG
+++ b/CHANGELOG
@@ -1,3 +1,22 @@
+4.3.1
+-----
+
+Technical release.
+
+4.3
+---
+
+First release after the move to Github. Issue and PR numbers from now on refer to the
+`Github repo <https://github.com/levitsky/pyteomics>`_. Archive of the Bibucket issues and PRs is stored
+`here <https://levitsky.github.io/bitbucket_backup/#!/levitsky/pyteomics>`_.
+
+Changes in this release:
+
+ - New module :py:mod:`pyteomics.openms.idxml`.
+
+ - Fix `#3 <https://github.com/levitsky/pyteomics/issues/3>`_, `#5 <https://github.com/levitsky/pyteomics/issues/5>`_,
+   and some issues in :py:mod:`tandem`.
+
 4.2
 ---
 
@@ -76,7 +95,7 @@ API changes
 4.0.1
 -----
 
-Fix issue `#35 <https://bitbucket.org/levitsky/pyteomics/issues/35/ordereddict-may-be-in-reversed-order-on>`_
+Fix issue `#35 <hhttps://levitsky.github.io/bitbucket_backup/#!/levitsky/pyteomics/issues/35/page/1>`_
 (incorrect order of deserialized offset indexes on older Python versions).
 
 4.0
diff --git a/PKGBUILD b/PKGBUILD
index 035fc76bd174..2120f7652b55 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,26 +1,26 @@
 # Maintainer: Lev Levitsky <levlev at mail dot ru>
 pkgname=python2-pyteomics
-pkgver=4.2
+pkgver=4.3.1
 pkgrel=1
 pkgdesc="A framework for proteomics data analysis."
 arch=('any')
 url="https://pyteomics.readthedocs.io"
 license=('Apache')
-depends=('python2' 'python2-setuptools')
+depends=('python2' 'python2-pip')
 optdepends=('python2-matplotlib: for pylab_aux module'
             'python2-sqlalchemy: for mass.unimod module'
             'python2-pandas: for convenient filtering of CSV tables from search engines'
             'python2-lxml: for XML parsing modules'
             'python2-numpy: for most of features, highly recommended'
-            'python2-dill: needed for multiprocessing when pickle is not enough')
+            'python2-dill: needed for multiprocessing when pickle is not enough'
+            'python2-pynumpress: for Numpress support')
 options=(!emptydirs)
-source=("https://pypi.io/packages/source/p/pyteomics/pyteomics-${pkgver}.tar.gz")
-install=
-sha256sums=('e4762659520b518df0d75e9fc2a1a011315fd0835ec501ae81583275d340ef1d')
+source=("https://pypi.debian.net/pyteomics/pyteomics-${pkgver}-py2.py3-none-any.whl")
+sha256sums=('be9367c5b9a828c11c7df943d5bed8ee24b5d2d5b63676fcddd789ea5ad98b73')
 changelog="CHANGELOG"
+
 package() {
-  cd "${srcdir}/pyteomics-${pkgver}"
-  python2 setup.py install --root="$pkgdir/" --optimize=1
+  pip2 install --ignore-installed --root "$pkgdir" "pyteomics-${pkgver}-py2.py3-none-any.whl"
 }
 
 # vim:set ts=2 sw=2 et: