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author | Lev Levitsky | 2019-05-07 15:37:29 +0300 |
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committer | Lev Levitsky | 2019-05-07 15:37:29 +0300 |
commit | d1eb3fbde5613481bdb9694fbe9e5c58da2eea2f (patch) | |
tree | 391847acdb0d78c17dd2cfebf6061a4ec81ba178 | |
parent | 72f72ca6041c82bfa2d6d5757f9e982170e82c14 (diff) | |
download | aur-d1eb3fbde5613481bdb9694fbe9e5c58da2eea2f.tar.gz |
Release 4.1.1
-rw-r--r-- | .SRCINFO | 6 | ||||
-rw-r--r-- | CHANGELOG | 19 | ||||
-rw-r--r-- | PKGBUILD | 4 |
3 files changed, 24 insertions, 5 deletions
@@ -1,6 +1,6 @@ pkgbase = python2-pyteomics pkgdesc = A framework for proteomics data analysis. - pkgver = 4.1 + pkgver = 4.1.1 pkgrel = 1 url = https://pyteomics.readthedocs.io changelog = CHANGELOG @@ -15,8 +15,8 @@ pkgbase = python2-pyteomics optdepends = python2-numpy: for most of features, highly recommended optdepends = python2-dill: needed for multiprocessing when pickle is not enough options = !emptydirs - source = https://pypi.io/packages/source/p/pyteomics/pyteomics-4.1.tar.gz - sha256sums = d7eaa5a1c6f25a39a42c4846e8c39e23cd3ba6f1aeeeedb730c3911c82bf6633 + source = https://pypi.io/packages/source/p/pyteomics/pyteomics-4.1.1.tar.gz + sha256sums = 384e4e5eabdbfec39d7c38369278e386a074c7066f33052d7c313af40f1aa45e pkgname = python2-pyteomics diff --git a/CHANGELOG b/CHANGELOG index 7f415978efda..72f042ff3daf 100644 --- a/CHANGELOG +++ b/CHANGELOG @@ -1,3 +1,22 @@ +4.1.1 +----- + + - Add `numpress <https://dx.doi.org/10.1074%2Fmcp.O114.037879>`_ support for mzML and mzXML files. + To read files compressed with Numpress, install `pynumpress` + (`PyPI <https://pypi.org/project/pynumpress/>`_, `GitHub <https://github.com/mobiusklein/pynumpress>`_). + + .. note:: There is a `known issue + <https://bitbucket.org/levitsky/pyteomics/issues/37/add-numpress-support-in-mzml#comment-51540079>`_ + with `pynumpress` on Linux and Python 2.7, which is contingent on a fix in Cython. + + - Bugfixes. + +API changes +........... + + - In :py:func:`ms1.read` and :py:func:`ms2.read`, the default value for `use_index` is now :py:const:`False`. + Using the indexed parsers may result in incorrect behavior if the "first" scan number in S-lines is not unique. + 4.1 --- @@ -1,6 +1,6 @@ # Maintainer: Lev Levitsky <levlev at mail dot ru> pkgname=python2-pyteomics -pkgver=4.1 +pkgver=4.1.1 pkgrel=1 pkgdesc="A framework for proteomics data analysis." arch=('any') @@ -15,7 +15,7 @@ optdepends=('python2-matplotlib: for pylab_aux module' 'python2-dill: needed for multiprocessing when pickle is not enough') options=(!emptydirs) source=("https://pypi.io/packages/source/p/pyteomics/pyteomics-${pkgver}.tar.gz") -sha256sums=('d7eaa5a1c6f25a39a42c4846e8c39e23cd3ba6f1aeeeedb730c3911c82bf6633') +sha256sums=('384e4e5eabdbfec39d7c38369278e386a074c7066f33052d7c313af40f1aa45e') changelog="CHANGELOG" package() { cd "${srcdir}/pyteomics-${pkgver}" |