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author | Pekka Ristola | 2023-10-15 11:31:35 +0300 |
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committer | Pekka Ristola | 2023-10-15 11:31:35 +0300 |
commit | 8dd96bcdc9daeeb45000711235fbb7aa0fcb21c1 (patch) | |
tree | 1551b3f7c387216500c060eed6976950d566cfb9 | |
download | aur-8dd96bcdc9daeeb45000711235fbb7aa0fcb21c1.tar.gz |
Version 1.0.0
-rw-r--r-- | .SRCINFO | 24 | ||||
-rw-r--r-- | PKGBUILD | 50 |
2 files changed, 74 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..7fd5f97386eb --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,24 @@ +pkgbase = r-alabaster.matrix + pkgdesc = Load and Save Artifacts from File + pkgver = 1.0.0 + pkgrel = 1 + url = https://bioconductor.org/packages/alabaster.matrix + arch = any + license = MIT + checkdepends = r-chihaya + checkdepends = r-testthat + depends = r-alabaster.base + depends = r-delayedarray + depends = r-hdf5array + depends = r-rhdf5 + optdepends = r-biocgenerics + optdepends = r-biocstyle + optdepends = r-chihaya + optdepends = r-knitr + optdepends = r-s4vectors + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/alabaster.matrix_1.0.0.tar.gz + md5sums = 4b93a993b0f4a9b3333da48a8f49ad36 + sha256sums = 637424bdb91f4f286cc1ed64405c5ef43c8ae96f849b038477536054344e1550 + +pkgname = r-alabaster.matrix diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..e2b73cacd295 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,50 @@ +# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> + +_pkgname=alabaster.matrix +_pkgver=1.0.0 +pkgname=r-${_pkgname,,} +pkgver=${_pkgver//-/.} +pkgrel=1 +pkgdesc="Load and Save Artifacts from File" +arch=(any) +url="https://bioconductor.org/packages/${_pkgname}" +license=(MIT) +depends=( + r-alabaster.base + r-delayedarray + r-hdf5array + r-rhdf5 +) +checkdepends=( + r-chihaya + r-testthat +) +optdepends=( + r-biocgenerics + r-biocstyle + r-chihaya + r-knitr + r-s4vectors + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('4b93a993b0f4a9b3333da48a8f49ad36') +sha256sums=('637424bdb91f4f286cc1ed64405c5ef43c8ae96f849b038477536054344e1550') + +build() { + mkdir -p build + R CMD INSTALL "$_pkgname" -l build +} + +check() { + cd "$_pkgname/tests" + R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R +} + +package() { + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" + + install -d "$pkgdir/usr/share/licenses/$pkgname" + ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname" +} |