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author | Pekka Ristola | 2023-10-15 08:34:36 +0300 |
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committer | Pekka Ristola | 2023-10-15 08:34:36 +0300 |
commit | 8a7bd13a02a37e7495415c42702001cdc10e817c (patch) | |
tree | 4d02554573d7fe16d60da1242257a221c618f1ea | |
download | aur-8a7bd13a02a37e7495415c42702001cdc10e817c.tar.gz |
Version 1.0.0
-rw-r--r-- | .SRCINFO | 23 | ||||
-rw-r--r-- | PKGBUILD | 49 |
2 files changed, 72 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..05dfb2508990 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,23 @@ +pkgbase = r-alabaster.ranges + pkgdesc = Load and Save Ranges-related Artifacts from File + pkgver = 1.0.0 + pkgrel = 1 + url = https://bioconductor.org/packages/alabaster.ranges + arch = any + license = MIT + checkdepends = r-testthat + depends = r-alabaster.base + depends = r-biocgenerics + depends = r-genomeinfodb + depends = r-genomicranges + depends = r-iranges + depends = r-s4vectors + optdepends = r-biocstyle + optdepends = r-jsonlite + optdepends = r-knitr + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/alabaster.ranges_1.0.0.tar.gz + md5sums = 846f2604ddc36ae98f28443f4b12d305 + sha256sums = af879e64215719d6b2afb823dce503181fc149feb190716ffdb4efd32ac6692d + +pkgname = r-alabaster.ranges diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..3cdf8afd55cc --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,49 @@ +# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> + +_pkgname=alabaster.ranges +_pkgver=1.0.0 +pkgname=r-${_pkgname,,} +pkgver=${_pkgver//-/.} +pkgrel=1 +pkgdesc="Load and Save Ranges-related Artifacts from File" +arch=(any) +url="https://bioconductor.org/packages/${_pkgname}" +license=(MIT) +depends=( + r-alabaster.base + r-biocgenerics + r-genomeinfodb + r-genomicranges + r-iranges + r-s4vectors +) +checkdepends=( + r-testthat +) +optdepends=( + r-biocstyle + r-jsonlite + r-knitr + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('846f2604ddc36ae98f28443f4b12d305') +sha256sums=('af879e64215719d6b2afb823dce503181fc149feb190716ffdb4efd32ac6692d') + +build() { + mkdir -p build + R CMD INSTALL "$_pkgname" -l build +} + +check() { + cd "$_pkgname/tests" + R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R +} + +package() { + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" + + install -d "$pkgdir/usr/share/licenses/$pkgname" + ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname" +} |