diff options
| author | Sukanka | 2022-06-06 01:55:18 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 01:55:18 +0800 |
| commit | 061412531cc798ee165093b4473d64adfb59e4dc (patch) | |
| tree | 59e352ddec77c33df43803ca8687b83b8530d150 | |
| download | aur-061412531cc798ee165093b4473d64adfb59e4dc.tar.gz | |
add r-aspli
| -rw-r--r-- | .SRCINFO | 31 | ||||
| -rw-r--r-- | PKGBUILD | 45 |
2 files changed, 76 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..df27aa106728 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,31 @@ +pkgbase = r-aspli + pkgdesc = Analysis of Alternative Splicing Using RNA-Seq + pkgver = 2.6.0 + pkgrel = 1 + url = https://bioconductor.org/packages/ASpli + arch = any + license = GPL + depends = r + depends = r-annotationdbi + depends = r-biocgenerics + depends = r-biocstyle + depends = r-data.table + depends = r-dt + depends = r-edger + depends = r-genomicalignments + depends = r-genomicfeatures + depends = r-genomicranges + depends = r-gviz + depends = r-htmltools + depends = r-igraph + depends = r-iranges + depends = r-limma + depends = r-pbmcapply + depends = r-rsamtools + depends = r-s4vectors + depends = r-tidyr + depends = r-upsetr + source = https://bioconductor.org/packages/release/bioc/src/contrib/ASpli_2.6.0.tar.gz + sha256sums = df7a78abe104f974adabe7040557244ef9a93dca682b664d7735928a146734bb + +pkgname = r-aspli diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..5c914d49e726 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,45 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=ASpli +_pkgver=2.6.0 +pkgname=r-${_pkgname,,} +pkgver=2.6.0 +pkgrel=1 +pkgdesc='Analysis of Alternative Splicing Using RNA-Seq' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-annotationdbi + r-biocgenerics + r-biocstyle + r-data.table + r-dt + r-edger + r-genomicalignments + r-genomicfeatures + r-genomicranges + r-gviz + r-htmltools + r-igraph + r-iranges + r-limma + r-pbmcapply + r-rsamtools + r-s4vectors + r-tidyr + r-upsetr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('df7a78abe104f974adabe7040557244ef9a93dca682b664d7735928a146734bb') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |