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author | Sukanka | 2022-06-06 02:19:16 +0800 |
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committer | Sukanka | 2022-06-06 02:19:16 +0800 |
commit | 783d8cbf6f5e9e1df039e26019d262fd93b76800 (patch) | |
tree | 8eb4879caf378db6dbfc62c200dcaaf6a1e32a12 | |
download | aur-783d8cbf6f5e9e1df039e26019d262fd93b76800.tar.gz |
add r-basics
-rw-r--r-- | .SRCINFO | 37 | ||||
-rw-r--r-- | PKGBUILD | 54 |
2 files changed, 91 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..080a7093f1e5 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,37 @@ +pkgbase = r-basics + pkgdesc = Bayesian Analysis of Single-Cell Sequencing data + pkgver = 2.8.0 + pkgrel = 1 + url = https://bioconductor.org/packages/BASiCS + arch = x86_64 + license = GPL + depends = r + depends = r-assertthat + depends = r-biobase + depends = r-biocgenerics + depends = r-biocparallel + depends = r-coda + depends = r-cowplot + depends = r-ggextra + depends = r-ggplot2 + depends = r-hexbin + depends = r-matrixstats + depends = r-rcpp + depends = r-rcpparmadillo + depends = r-reshape2 + depends = r-s4vectors + depends = r-scran + depends = r-scuttle + depends = r-singlecellexperiment + depends = r-summarizedexperiment + depends = r-viridis + depends = gcc + optdepends = r-biocstyle + optdepends = r-knitr + optdepends = r-magick + optdepends = r-rmarkdown + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/BASiCS_2.8.0.tar.gz + sha256sums = d6c603246c5b3c641d4d5aef0d2d0285ff2e46246fc8ab94880c8bcd7a20e019 + +pkgname = r-basics diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..8eefccaad66b --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,54 @@ +# system requirements: C++11 +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=BASiCS +_pkgver=2.8.0 +pkgname=r-${_pkgname,,} +pkgver=2.8.0 +pkgrel=1 +pkgdesc='Bayesian Analysis of Single-Cell Sequencing data' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-assertthat + r-biobase + r-biocgenerics + r-biocparallel + r-coda + r-cowplot + r-ggextra + r-ggplot2 + r-hexbin + r-matrixstats + r-rcpp + r-rcpparmadillo + r-reshape2 + r-s4vectors + r-scran + r-scuttle + r-singlecellexperiment + r-summarizedexperiment + r-viridis + gcc +) +optdepends=( + r-biocstyle + r-knitr + r-magick + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('d6c603246c5b3c641d4d5aef0d2d0285ff2e46246fc8ab94880c8bcd7a20e019') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |