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author | BioArchLinuxBot | 2024-02-11 12:04:06 +0000 |
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committer | BioArchLinuxBot | 2024-02-11 12:04:06 +0000 |
commit | e2c3b4094db2203340878ae5289bd5e76a641e3a (patch) | |
tree | a54604201364dfb225c53b09c0e3a030b1c04320 | |
parent | 13d65cb7ff27092bf72fcbcc2e0361255a6a9272 (diff) | |
download | aur-r-bdmmacorrect.tar.gz |
[lilac] updated to 1.18.1-2
-rw-r--r-- | .SRCINFO | 11 | ||||
-rw-r--r-- | PKGBUILD | 27 |
2 files changed, 20 insertions, 18 deletions
@@ -1,11 +1,11 @@ pkgbase = r-bdmmacorrect pkgdesc = Meta-analysis for the metagenomic read counts data from different cohorts pkgver = 1.18.1 - pkgrel = 1 + pkgrel = 2 url = https://bioconductor.org/packages/BDMMAcorrect arch = x86_64 - license = GPL - depends = r + license = GPL-2.0-or-later + depends = blas depends = r-ape depends = r-ellipse depends = r-ggplot2 @@ -17,7 +17,8 @@ pkgbase = r-bdmmacorrect optdepends = r-biocgenerics optdepends = r-knitr optdepends = r-rmarkdown - source = https://bioconductor.org/packages/release/bioc/src/contrib/BDMMAcorrect_1.18.1.tar.gz - sha256sums = 47a2067b8957800f2832957bc698ad26df39b1869db23ca913d37d560b7d9a9e + source = https://bioconductor.org/packages/3.17/bioc/src/contrib/BDMMAcorrect_1.18.1.tar.gz + md5sums = 7dae9023d884c07857b4378154d8912b + b2sums = 763218d7acbe8bfce7e19e6834c281fd2086a402da0cedfd52f32d320f7fa91ff8de816fa266d4e5e4358312e2b9dbe0360c640cbfcf0123a4e24fb61235f848 pkgname = r-bdmmacorrect @@ -3,14 +3,14 @@ _pkgname=BDMMAcorrect _pkgver=1.18.1 pkgname=r-${_pkgname,,} -pkgver=1.18.1 -pkgrel=1 -pkgdesc='Meta-analysis for the metagenomic read counts data from different cohorts' -arch=('x86_64') -url="https://bioconductor.org/packages/${_pkgname}" -license=('GPL') +pkgver=${_pkgver//-/.} +pkgrel=2 +pkgdesc="Meta-analysis for the metagenomic read counts data from different cohorts" +arch=(x86_64) +url="https://bioconductor.org/packages/$_pkgname" +license=('GPL-2.0-or-later') depends=( - r + blas r-ape r-ellipse r-ggplot2 @@ -25,15 +25,16 @@ optdepends=( r-knitr r-rmarkdown ) -source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('47a2067b8957800f2832957bc698ad26df39b1869db23ca913d37d560b7d9a9e') +source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('7dae9023d884c07857b4378154d8912b') +b2sums=('763218d7acbe8bfce7e19e6834c281fd2086a402da0cedfd52f32d320f7fa91ff8de816fa266d4e5e4358312e2b9dbe0360c640cbfcf0123a4e24fb61235f848') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |