add r-bigmelon

2 files changed, 72 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..46cfa8301509
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,28 @@
+pkgbase = r-bigmelon
+	pkgdesc = Illumina methylation array analysis for large experiments
+	pkgver = 1.22.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/bigmelon
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-biobase
+	depends = r-biocgenerics
+	depends = r-gdsfmt
+	depends = r-geoquery
+	depends = r-illuminaio
+	depends = r-methylumi
+	depends = r-minfi
+	depends = r-watermelon
+	optdepends = r-biocgenerics
+	optdepends = r-biocstyle
+	optdepends = r-bumphunter
+	optdepends = r-illuminahumanmethylation450kanno.ilmn12.hg19
+	optdepends = r-illuminahumanmethylationepicanno.ilm10b2.hg19
+	optdepends = r-minfidata
+	optdepends = r-parallel
+	optdepends = r-runit
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/bigmelon_1.22.0.tar.gz
+	sha256sums = 53c0133043049887732071125743fa48f0d48cec03f0b5c0c66dbab830814cd7
+
+pkgname = r-bigmelon
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..0d85a058fd19
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,44 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=bigmelon
+_pkgver=1.22.0
+pkgname=r-${_pkgname,,}
+pkgver=1.22.0
+pkgrel=1
+pkgdesc='Illumina methylation array analysis for large experiments'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-biocgenerics
+  r-gdsfmt
+  r-geoquery
+  r-illuminaio
+  r-methylumi
+  r-minfi
+  r-watermelon
+)
+optdepends=(
+  r-biocgenerics
+  r-biocstyle
+  r-bumphunter
+  r-illuminahumanmethylation450kanno.ilmn12.hg19
+  r-illuminahumanmethylationepicanno.ilm10b2.hg19
+  r-minfidata
+  r-parallel
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('53c0133043049887732071125743fa48f0d48cec03f0b5c0c66dbab830814cd7')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: