upgpkg: r-biobase 2.62.0-1

upstream release

2 files changed, 9 insertions, 5 deletions

diff --git a/.SRCINFO b/.SRCINFO
index da08d7aee541..ca1e856a465f 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
 pkgbase = r-biobase
 	pkgdesc = Biobase: Base functions for Bioconductor
-	pkgver = 2.60.0
+	pkgver = 2.62.0
 	pkgrel = 1
 	url = https://bioconductor.org/packages/release/bioc/html/Biobase.html
 	arch = i686
@@ -9,10 +9,12 @@ pkgbase = r-biobase
 	depends = r>=2.10
 	depends = r-biocgenerics>=0.27.1
 	optdepends = r-all
+	optdepends = r-biocstyle
 	optdepends = r-golubesets
+	optdepends = r-knitr
 	optdepends = r-runit
 	optdepends = r-tkwidgets
-	source = https://bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.60.0.tar.gz
-	b2sums = 77974e739954c05514ef19a77375977de64e05376e2959c842b771d04a635805279d9248792c809f00d5e815f97e2d329b773fe49bf46b00c568bd087de73ee1
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.62.0.tar.gz
+	b2sums = 713baaea0bf34b8ab230cc101f4304b00e34bb4588efde71a860016e58d56f20f2dd5592df6731ffc5e2f85130ea50e08fdb26b1a5023e4d7d87928aeaa35174
 
 pkgname = r-biobase
diff --git a/PKGBUILD b/PKGBUILD
index 9b29fba5e0f9..a248084c8cb7 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,7 +3,7 @@
 # Contributor: Grey Christoforo <first name at last name dot net>
 
 _bcname=Biobase
-_bcver=2.60.0
+_bcver=2.62.0
 pkgname=r-${_bcname,,}
 pkgver=${_bcver//[:-]/.}
 pkgrel=1
@@ -17,12 +17,14 @@ depends=(
 )
 optdepends=(
     "r-all"
+    "r-biocstyle"
     "r-golubesets"
+    "r-knitr"
     "r-runit"
     "r-tkwidgets"
 )
 source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-b2sums=("77974e739954c05514ef19a77375977de64e05376e2959c842b771d04a635805279d9248792c809f00d5e815f97e2d329b773fe49bf46b00c568bd087de73ee1")
+b2sums=("713baaea0bf34b8ab230cc101f4304b00e34bb4588efde71a860016e58d56f20f2dd5592df6731ffc5e2f85130ea50e08fdb26b1a5023e4d7d87928aeaa35174")
 
 build(){
   R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"