diff options
author | Viktor Drobot | 2020-01-31 15:54:59 +0300 |
---|---|---|
committer | Viktor Drobot | 2020-01-31 15:54:59 +0300 |
commit | 125018cb5547ef01e00dac4a5344227d4e437471 (patch) | |
tree | e41c0dc82e2e04b467a24c66d7f4fb8c2c65eda0 | |
parent | 85d349b11d9151ca736a1a6d67a06e74a890d4bb (diff) | |
download | aur-125018cb5547ef01e00dac4a5344227d4e437471.tar.gz |
FIxed PKGBUILD
-rw-r--r-- | .SRCINFO | 2 | ||||
-rw-r--r-- | PKGBUILD | 23 |
2 files changed, 12 insertions, 13 deletions
@@ -32,7 +32,7 @@ pkgbase = r-biocparallel optdepends = r-batchtools optdepends = r-data.table source = https://bioconductor.org/packages/release/bioc/src/contrib/BiocParallel_1.20.1.tar.gz - sha1sums = 99be1cf32bb153b958c6af5834e89f541b23876d + sha256sums = 41c0a0690ea9cadcf2c3be5d8638969bd8129b56aaa7ce2f4c6b6bc8c9b21f3c pkgname = r-biocparallel @@ -1,31 +1,30 @@ -# Maintainer: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com +# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com # Contributor: Grey Christoforo <first name at last name dot net> _bcname=BiocParallel _bcver=1.20.1 -pkgname=r-biocparallel +pkgname=r-${_bcname,,} pkgver=${_bcver//[:-]/.} pkgrel=1 pkgdesc="Bioconductor facilities for parallel evaluation" -url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html" arch=(i686 x86_64) -license=('GPL2' 'GPL3') -depends=('r' 'r-futile.logger' 'r-snow' 'r-bh') +url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html" +license=(GPL2 GPL3) +depends=(r r-futile.logger r-snow r-bh) makedepends=('gcc>=4.3') -optdepends=('r-biocgenerics' 'r-foreach' 'r-batchjobs' 'r-bbmisc' 'r-doparallel' 'r-rmpi' 'r-genomicranges' 'r-rnaseqdata.hnrnpc.bam.chr14' 'r-txdb.hsapiens.ucsc.hg19.knowngene' 'r-variantannotation' 'r-rsamtools' 'r-genomicalignments' 'r-shortread' 'r-codetools' 'r-runit' 'r-biocstyle' 'r-knitr' 'r-batchtools' 'r-data.table') +optdepends=(r-biocgenerics r-foreach r-batchjobs r-bbmisc r-doparallel r-rmpi r-genomicranges r-rnaseqdata.hnrnpc.bam.chr14 r-txdb.hsapiens.ucsc.hg19.knowngene r-variantannotation r-rsamtools r-genomicalignments r-shortread r-codetools r-runit r-biocstyle r-knitr r-batchtools r-data.table) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz") -sha1sums=('99be1cf32bb153b958c6af5834e89f541b23876d') +sha256sums=('41c0a0690ea9cadcf2c3be5d8638969bd8129b56aaa7ce2f4c6b6bc8c9b21f3c') -build(){ +build() { cd "${srcdir}" - R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l $srcdir + R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l ${srcdir} } package() { cd "${srcdir}" - install -dm0755 "$pkgdir/usr/lib/R/library" - cp -a --no-preserve=ownership "$_bcname" "$pkgdir/usr/lib/R/library" + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library" } - |