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authorViktor Drobot2020-01-31 15:54:59 +0300
committerViktor Drobot2020-01-31 15:54:59 +0300
commit125018cb5547ef01e00dac4a5344227d4e437471 (patch)
treee41c0dc82e2e04b467a24c66d7f4fb8c2c65eda0
parent85d349b11d9151ca736a1a6d67a06e74a890d4bb (diff)
downloadaur-125018cb5547ef01e00dac4a5344227d4e437471.tar.gz
FIxed PKGBUILD
-rw-r--r--.SRCINFO2
-rw-r--r--PKGBUILD23
2 files changed, 12 insertions, 13 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 411ca6501ef2..e4dfc46c52c7 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -32,7 +32,7 @@ pkgbase = r-biocparallel
optdepends = r-batchtools
optdepends = r-data.table
source = https://bioconductor.org/packages/release/bioc/src/contrib/BiocParallel_1.20.1.tar.gz
- sha1sums = 99be1cf32bb153b958c6af5834e89f541b23876d
+ sha256sums = 41c0a0690ea9cadcf2c3be5d8638969bd8129b56aaa7ce2f4c6b6bc8c9b21f3c
pkgname = r-biocparallel
diff --git a/PKGBUILD b/PKGBUILD
index 5d0ead9e096f..3c26bc9fc290 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,31 +1,30 @@
-# Maintainer: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
+# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=BiocParallel
_bcver=1.20.1
-pkgname=r-biocparallel
+pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
pkgdesc="Bioconductor facilities for parallel evaluation"
-url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
arch=(i686 x86_64)
-license=('GPL2' 'GPL3')
-depends=('r' 'r-futile.logger' 'r-snow' 'r-bh')
+url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
+license=(GPL2 GPL3)
+depends=(r r-futile.logger r-snow r-bh)
makedepends=('gcc>=4.3')
-optdepends=('r-biocgenerics' 'r-foreach' 'r-batchjobs' 'r-bbmisc' 'r-doparallel' 'r-rmpi' 'r-genomicranges' 'r-rnaseqdata.hnrnpc.bam.chr14' 'r-txdb.hsapiens.ucsc.hg19.knowngene' 'r-variantannotation' 'r-rsamtools' 'r-genomicalignments' 'r-shortread' 'r-codetools' 'r-runit' 'r-biocstyle' 'r-knitr' 'r-batchtools' 'r-data.table')
+optdepends=(r-biocgenerics r-foreach r-batchjobs r-bbmisc r-doparallel r-rmpi r-genomicranges r-rnaseqdata.hnrnpc.bam.chr14 r-txdb.hsapiens.ucsc.hg19.knowngene r-variantannotation r-rsamtools r-genomicalignments r-shortread r-codetools r-runit r-biocstyle r-knitr r-batchtools r-data.table)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-sha1sums=('99be1cf32bb153b958c6af5834e89f541b23876d')
+sha256sums=('41c0a0690ea9cadcf2c3be5d8638969bd8129b56aaa7ce2f4c6b6bc8c9b21f3c')
-build(){
+build() {
cd "${srcdir}"
- R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l $srcdir
+ R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l ${srcdir}
}
package() {
cd "${srcdir}"
- install -dm0755 "$pkgdir/usr/lib/R/library"
- cp -a --no-preserve=ownership "$_bcname" "$pkgdir/usr/lib/R/library"
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
}
-