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authorBioArchLinuxBot2024-05-02 20:33:00 +0000
committerBioArchLinuxBot2024-05-02 20:33:00 +0000
commita88b70ac23c64890133886a6f1c65802ce3d9819 (patch)
treebe4e0addec18a7cab8a503aeb389a0d72f1b3c27
parentfc2cd295a1fe76305a2e0ca027d24b63a69c347d (diff)
downloadaur-a88b70ac23c64890133886a6f1c65802ce3d9819.tar.gz
[lilac] updated to 2.60.0-1
-rw-r--r--.SRCINFO15
-rw-r--r--PKGBUILD29
2 files changed, 21 insertions, 23 deletions
diff --git a/.SRCINFO b/.SRCINFO
index e16213e3bdae..852b423c1282 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,27 +1,26 @@
pkgbase = r-biomart
pkgdesc = Interface to BioMart databases (i.e. Ensembl)
- pkgver = 2.58.2
+ pkgver = 2.60.0
pkgrel = 1
url = https://bioconductor.org/packages/biomaRt
arch = any
- license = Artistic2.0
- depends = r
+ license = Artistic-2.0
depends = r-annotationdbi
depends = r-biocfilecache
depends = r-digest
- depends = r-httr
+ depends = r-httr2
depends = r-progress
depends = r-rappdirs
depends = r-stringr
- depends = r-xml
depends = r-xml2
optdepends = r-biocstyle
+ optdepends = r-httptest2
optdepends = r-knitr
optdepends = r-mockery
optdepends = r-rmarkdown
optdepends = r-testthat
- optdepends = r-webmockr
- source = https://bioconductor.org/packages/release/bioc/src/contrib/biomaRt_2.58.2.tar.gz
- sha256sums = 4484dd7ab2a382af67c97d97944ff4bdbdc2ff1fc5f0c4ff23dc4e772431140e
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/biomaRt_2.60.0.tar.gz
+ md5sums = c0a5e3d450e119dfd62a5d665f6f596e
+ b2sums = 453c71d3dd75f1f118c6c55bf4551c4c5de3e9c09fbd70fad1d0f8e03cea29ad32e0b0ac221328a2809bdc393b372e947d7118425fe27ece4ab6291c22b55a6e
pkgname = r-biomart
diff --git a/PKGBUILD b/PKGBUILD
index f506ab340db8..e016a52e32b9 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,43 +1,42 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=biomaRt
-_pkgver=2.58.2
+_pkgver=2.60.0
pkgname=r-${_pkgname,,}
-pkgver=2.58.2
+pkgver=${_pkgver//-/.}
pkgrel=1
-pkgdesc='Interface to BioMart databases (i.e. Ensembl)'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('Artistic2.0')
+pkgdesc="Interface to BioMart databases (i.e. Ensembl)"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('Artistic-2.0')
depends=(
- r
r-annotationdbi
r-biocfilecache
r-digest
- r-httr
+ r-httr2
r-progress
r-rappdirs
r-stringr
- r-xml
r-xml2
)
optdepends=(
r-biocstyle
+ r-httptest2
r-knitr
r-mockery
r-rmarkdown
r-testthat
- r-webmockr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('4484dd7ab2a382af67c97d97944ff4bdbdc2ff1fc5f0c4ff23dc4e772431140e')
+md5sums=('c0a5e3d450e119dfd62a5d665f6f596e')
+b2sums=('453c71d3dd75f1f118c6c55bf4551c4c5de3e9c09fbd70fad1d0f8e03cea29ad32e0b0ac221328a2809bdc393b372e947d7118425fe27ece4ab6291c22b55a6e')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: