add r-biomformat

2 files changed, 54 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..4a32a990b79d
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,19 @@
+pkgbase = r-biomformat
+	pkgdesc = An interface package for the BIOM file format
+	pkgver = 1.24.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/biomformat
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-jsonlite
+	depends = r-plyr
+	depends = r-rhdf5
+	optdepends = r-biocstyle
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/biomformat_1.24.0.tar.gz
+	sha256sums = 3669661b489e5bb1b1e230cf6989e2c2d759714b62f4dab2a5f559d86f94988b
+
+pkgname = r-biomformat
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..4d49fc653c8d
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,35 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=biomformat
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=1.24.0
+pkgrel=1
+pkgdesc='An interface package for the BIOM file format'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-jsonlite
+  r-plyr
+  r-rhdf5
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('3669661b489e5bb1b1e230cf6989e2c2d759714b62f4dab2a5f559d86f94988b')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: